RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 B9D2Q9BPU9 175 aa16.41■□□□□ 0.22
PSMD11-206ENST00000578213 A0A0J9YX75 114 aa16.4■□□□□ 0.22
PSMD11-206ENST00000578213 KNCNA6PVL3 124 aa16.4■□□□□ 0.22
PSMD11-206ENST00000578213 H3BMM0 161 aa16.4■□□□□ 0.22
PSMD11-206ENST00000578213 HLA-DMBP28068 263 aa16.4■□□□□ 0.22
PSMD11-206ENST00000578213 FAM74A1Q5RGS3 127 aa16.4■□□□□ 0.22
PSMD11-206ENST00000578213 OTORQ9NRC9 128 aa16.4■□□□□ 0.22
PSMD11-206ENST00000578213 TEX46H3BTG2 121 aa16.39■□□□□ 0.21
PSMD11-206ENST00000578213 DUSP14O95147 198 aaKnown RBP16.39■□□□□ 0.21
PSMD11-206ENST00000578213 H2AFB1P0C5Y9 115 aa16.39■□□□□ 0.21
PSMD11-206ENST00000578213 RANP62826 216 aaKnown RBP16.39■□□□□ 0.21
PSMD11-206ENST00000578213 ARL6IP6Q8N6S5 226 aa16.39■□□□□ 0.21
PSMD11-206ENST00000578213 Q9H3A6 140 aa16.39■□□□□ 0.21
PSMD11-206ENST00000578213 A8MTW9 85 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 ICAM4Q14773 271 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 MORN3Q6PF18 240 aaPredicted RBP16.38■□□□□ 0.21
PSMD11-206ENST00000578213 IQCF2Q8IXL9 164 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 EXOC3-AS1Q8N2X6 119 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 OR8A1Q8NGG7 326 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 SFT2D1Q8WV19 159 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 ARL2-SNX15V9GYD0 113 aa16.38■□□□□ 0.21
PSMD11-206ENST00000578213 TRAV1-1A0A0B4J248 108 aa16.37■□□□□ 0.21
PSMD11-206ENST00000578213 UBE2CO00762 179 aa16.37■□□□□ 0.21
PSMD11-206ENST00000578213 FGF8P55075 233 aaPredicted RBP16.37■□□□□ 0.21
PSMD11-206ENST00000578213 NUTF2P61970 127 aaKnown RBP16.37■□□□□ 0.21
PSMD11-206ENST00000578213 GDF5OSQ5U4N7 250 aa16.37■□□□□ 0.21
PSMD11-206ENST00000578213 ALKAL2Q6UX46 152 aa16.37■□□□□ 0.21
PSMD11-206ENST00000578213 RXFP4Q8TDU9 374 aa16.37■□□□□ 0.21
PSMD11-206ENST00000578213 A0A1W2PRE2 83 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 F6UB75 175 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 M0R3E3 92 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 HBE1P02100 147 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 RPL35AP18077 110 aaKnown RBP16.36■□□□□ 0.21
PSMD11-206ENST00000578213 CSN1S1P47710 185 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 PPT1P50897 306 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 OR10J6PQ8NGY7 276 aa16.36■□□□□ 0.21
PSMD11-206ENST00000578213 NKX6-2Q9C056 277 aaPredicted RBP16.36■□□□□ 0.21
PSMD11-206ENST00000578213 DEFB1P60022 68 aa16.35■□□□□ 0.21
PSMD11-206ENST00000578213 HAGHQ16775 308 aa16.35■□□□□ 0.21
PSMD11-206ENST00000578213 CSTL1Q9H114 145 aa16.35■□□□□ 0.21
PSMD11-206ENST00000578213 ZNF705FA8MVS1 300 aaPredicted RBP16.34■□□□□ 0.21
PSMD11-206ENST00000578213 ZNF705EA8MWA4 302 aaPredicted RBP16.34■□□□□ 0.21
PSMD11-206ENST00000578213 CNN1P51911 297 aaKnown RBP16.34■□□□□ 0.21
PSMD11-206ENST00000578213 HIST1H1AQ02539 215 aaPredicted RBP16.34■□□□□ 0.21
PSMD11-206ENST00000578213 CMTM2Q8TAZ6 248 aa16.34■□□□□ 0.21
PSMD11-206ENST00000578213 TMPRSS5Q9H3S3 457 aa16.34■□□□□ 0.21
PSMD11-206ENST00000578213 PGPA6NDG6 321 aa16.33■□□□□ 0.2
PSMD11-206ENST00000578213 C5orf17Q8NAS9 161 aa16.33■□□□□ 0.2
PSMD11-206ENST00000578213 OR4B1Q8NGF8 309 aa16.33■□□□□ 0.2
PSMD11-206ENST00000578213 C1QTNF4Q9BXJ3 329 aa16.33■□□□□ 0.2
PSMD11-206ENST00000578213 RBAKDNA6NC62 111 aa16.32■□□□□ 0.2
PSMD11-206ENST00000578213 SLC25A5P05141 298 aaKnown RBP16.32■□□□□ 0.2
PSMD11-206ENST00000578213 NHLRC4P0CG21 123 aaPredicted RBP16.32■□□□□ 0.2
PSMD11-206ENST00000578213 BLOC1S1P78537 153 aa16.32■□□□□ 0.2
PSMD11-206ENST00000578213 Q6ZWC4 215 aa16.32■□□□□ 0.2
PSMD11-206ENST00000578213 SBSPONQ8IVN8 264 aa16.32■□□□□ 0.2
PSMD11-206ENST00000578213 SERTM2A0A1B0GWG4 89 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 FAM74A7A6NL05 159 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 PRAC2D3DTV9 90 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 NPIPB6E9PJ23 425 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 TEX261Q6UWH6 196 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 ODF3Q96PU9 254 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 TM2D3Q9BRN9 247 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 TCEAL7Q9BRU2 100 aa16.31■□□□□ 0.2
PSMD11-206ENST00000578213 GGTLC3B5MD39 225 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 CA1P00915 261 aaPredicted RBP16.3■□□□□ 0.2
PSMD11-206ENST00000578213 IFNA7P01567 189 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 AMBPP02760 352 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 AMTNQ6UX39 209 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 C9orf47Q6ZRZ4 202 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 SPATA25Q9BR10 227 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 MANBALQ9NQG1 85 aa16.3■□□□□ 0.2
PSMD11-206ENST00000578213 DIRC3C9JPN6 131 aa16.29■□□□□ 0.2
PSMD11-206ENST00000578213 ZNF705DP0CH99 300 aaPredicted RBP16.29■□□□□ 0.2
PSMD11-206ENST00000578213 ZNF705BP0CI00 300 aaPredicted RBP16.29■□□□□ 0.2
PSMD11-206ENST00000578213 SUMO1P63165 101 aaKnown RBP16.29■□□□□ 0.2
PSMD11-206ENST00000578213 PMS2P11Q13670 270 aa16.29■□□□□ 0.2
PSMD11-206ENST00000578213 LINC00477Q96M19 166 aa16.29■□□□□ 0.2
PSMD11-206ENST00000578213 TP53TG1Q9Y2A0 90 aa16.29■□□□□ 0.2
PSMD11-206ENST00000578213 YTHDF2Q9Y5A9 579 aaKnown RBP16.29■□□□□ 0.2
PSMD11-206ENST00000578213 NBEAL2Q6ZNJ1 2754 aa16.29■□□□□ 0.2
PSMD11-206ENST00000578213 DNAH9Q9NYC9 4486 aa16.29■□□□□ 0.2
PSMD11-206ENST00000578213 IGKV3-20P01619 116 aa16.28■□□□□ 0.2
PSMD11-206ENST00000578213 UBE2G2P60604 165 aa16.28■□□□□ 0.2
PSMD11-206ENST00000578213 ZMAT4Q9H898 229 aa16.28■□□□□ 0.2
PSMD11-206ENST00000578213 PPP1R14DQ9NXH3 145 aa16.28■□□□□ 0.2
PSMD11-206ENST00000578213 A0A1B0GV50 99 aa16.27■□□□□ 0.2
PSMD11-206ENST00000578213 K7EQM0 130 aa16.27■□□□□ 0.2
PSMD11-206ENST00000578213 TMEM78Q5T7P6 136 aa16.27■□□□□ 0.2
PSMD11-206ENST00000578213 ZNF680Q8NEM1 530 aa16.27■□□□□ 0.2
PSMD11-206ENST00000578213 ASCL2Q99929 193 aa16.27■□□□□ 0.2
PSMD11-206ENST00000578213 COL7A1Q02388 2944 aa16.26■□□□□ 0.19
PSMD11-206ENST00000578213 IGKV2-40A0A087WW87 121 aaPredicted RBP16.26■□□□□ 0.19
PSMD11-206ENST00000578213 TRBV7-9A0A0J9YWB2 115 aa16.26■□□□□ 0.19
PSMD11-206ENST00000578213 IFNA1P01562 189 aa16.26■□□□□ 0.19
PSMD11-206ENST00000578213 IGKV2D-40P01614 121 aaPredicted RBP16.26■□□□□ 0.19
PSMD11-206ENST00000578213 GIG44P09565 113 aaPredicted RBP16.26■□□□□ 0.19
PSMD11-206ENST00000578213 TSPOP30536 169 aa16.26■□□□□ 0.19
PSMD11-206ENST00000578213 TAGLN2P37802 199 aaKnown RBP16.26■□□□□ 0.19
PSMD11-206ENST00000578213 TXNDC17Q9BRA2 123 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms