RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ADGBQ8N7X0 1667 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 TCOF1Q13428 1488 aaKnown RBP0.25□□□□□ -2.37
TOP2A-202ENST00000577541 TRAV23DV6A0A075B6W5 121 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 A0A0D9SG42 100 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 C17orf112F2Z3M2 114 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 JMJD7-PLA2G4BH0Y9G9 81 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 H3BRM9 83 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 IFNA14P01570 189 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 KRTAP2-3P0C7H8 128 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 COX7CP15954 63 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 S100A11P31949 105 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 MYL5Q02045 173 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 HAGHLQ6PII5 290 aaPredicted RBP0.25□□□□□ -2.37
TOP2A-202ENST00000577541 LRRC18Q8N456 261 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 STX19Q8N4C7 294 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 FAM24BQ8N5W8 94 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 FAM216BQ8N7L0 139 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 PLPP5Q8NEB5 264 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 NUP35Q8NFH5 326 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 DIRC1Q969H9 104 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 MRPL57Q9BQC6 102 aaKnown RBP0.25□□□□□ -2.37
TOP2A-202ENST00000577541 KRTAP2-4Q9BYR9 128 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 KRTAP2-1Q9BYU5 128 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 OR2H1Q9GZK4 316 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 PCBD2Q9H0N5 130 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 BOLA2Q9H3K6 86 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 TMEM138Q9NPI0 162 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 BIN3Q9NQY0 253 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 MED11Q9P086 117 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 NAT8BQ9UHF3 227 aa0.25□□□□□ -2.37
TOP2A-202ENST00000577541 SNRNP200O75643 2136 aaKnown RBP0.25□□□□□ -2.37
TOP2A-202ENST00000577541 PIK3C2AO00443 1686 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 TRAPPC8Q9Y2L5 1435 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 TRAV27A0A087WT01 109 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 TRAV5A0A0B4J249 113 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 MAP1LC3B2A6NCE7 125 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 NUPR2A6NF83 97 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 E5RI56 91 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 PPP5D1E7EU14 171 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 AIPO00170 330 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 CST7O76096 145 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 MT-ND6P03923 174 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 FREM3P0C091 2139 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 RPS3P23396 243 aaKnown RBP eCLIP0.24□□□□□ -2.37
TOP2A-202ENST00000577541 S100A5P33763 92 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 SCGB2B2Q4G0G5 96 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 TRIQKQ629K1 86 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 DCUN1D2Q6PH85 259 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 C2orf82Q6UX34 121 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 CLEC2BQ92478 149 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 MAP1LC3BQ9GZQ8 125 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 IL20Q9NYY1 176 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 TRAPPC2LQ9UL33 140 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
TOP2A-202ENST00000577541 USP54Q70EL1 1684 aa0.24□□□□□ -2.37
TOP2A-202ENST00000577541 FANCMQ8IYD8 2048 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 KDM6AO15550 1401 aaPredicted RBP0.23□□□□□ -2.37
TOP2A-202ENST00000577541 PTPRFP10586 1907 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 MYLKQ15746 1914 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 ANKRD31Q8N7Z5 1873 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.23□□□□□ -2.37
TOP2A-202ENST00000577541 PHGR1C9JFL3 82 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 K7EIL1 84 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 APOA2P02652 100 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 FABP2P12104 132 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 FABP4P15090 132 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 RPL35P42766 123 aaKnown RBP0.23□□□□□ -2.37
TOP2A-202ENST00000577541 POLR2HP52434 150 aaKnown RBP0.23□□□□□ -2.37
TOP2A-202ENST00000577541 TCTAP57738 103 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 FXYD4P59646 89 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 TEN1Q86WV5 123 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 THEM6Q8WUY1 208 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 C4orf3Q8WVX3 66 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 NABP2Q9BQ15 211 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 LPAR5Q9H1C0 372 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 TNFSF18Q9UNG2 199 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 NUBP2Q9Y5Y2 271 aa0.23□□□□□ -2.37
TOP2A-202ENST00000577541 ASCC3Q8N3C0 2202 aaKnown RBP0.23□□□□□ -2.37
TOP2A-202ENST00000577541 MUC4Q99102 2169 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 LOC107984640A0A0U1RRK4 108 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 M0QZK8 103 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 PGRMC1O00264 195 aaKnown RBP0.22□□□□□ -2.37
TOP2A-202ENST00000577541 KPNA4O00629 521 aaPredicted RBP0.22□□□□□ -2.37
TOP2A-202ENST00000577541 FOXA3P55318 350 aaPredicted RBP0.22□□□□□ -2.37
TOP2A-202ENST00000577541 RPL37AP61513 92 aaKnown RBP0.22□□□□□ -2.37
TOP2A-202ENST00000577541 DIAPH2-AS1Q14236 149 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 VMA21Q3ZAQ7 101 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 OCIAD2Q56VL3 154 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 Q5XG85 94 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 CSAG1Q6PB30 78 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 IFT20Q8IY31 132 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 OR10AC1Q8NH08 325 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 GRPEL2Q8TAA5 225 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 OR4C12Q96R67 309 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 MED31Q9Y3C7 131 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 DLC1Q96QB1 1528 aa0.22□□□□□ -2.37
TOP2A-202ENST00000577541 MYO18AQ92614 2054 aaKnown RBP0.22□□□□□ -2.38
TOP2A-202ENST00000577541 FGD6Q6ZV73 1430 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 YTHDC2Q9H6S0 1430 aaKnown RBP0.21□□□□□ -2.38
TOP2A-202ENST00000577541 ZDBF2Q9HCK1 2354 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms