RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 MRPL53Q96EL3 112 aaKnown RBP16.92■□□□□ 0.3
SNF8-217ENST00000576353 PRELID1Q9Y255 219 aa16.92■□□□□ 0.3
SNF8-217ENST00000576353 PRAC2D3DTV9 90 aa16.91■□□□□ 0.3
SNF8-217ENST00000576353 CRXO43186 299 aaPredicted RBP16.91■□□□□ 0.3
SNF8-217ENST00000576353 NDUFB4O95168 129 aa16.91■□□□□ 0.3
SNF8-217ENST00000576353 NBEAP1P0C6P0 100 aa16.91■□□□□ 0.3
SNF8-217ENST00000576353 PRB4P10163 310 aaPredicted RBP16.91■□□□□ 0.3
SNF8-217ENST00000576353 OR2T35Q8NGX2 323 aa16.91■□□□□ 0.3
SNF8-217ENST00000576353 PAXXQ9BUH6 204 aa16.91■□□□□ 0.3
SNF8-217ENST00000576353 AAMDCQ9H7C9 122 aa16.91■□□□□ 0.3
SNF8-217ENST00000576353 C11orf94C9JXX5 98 aa16.9■□□□□ 0.3
SNF8-217ENST00000576353 RRN3P1Q2M238 152 aa16.9■□□□□ 0.3
SNF8-217ENST00000576353 BAP18Q8IXM2 172 aa16.9■□□□□ 0.3
SNF8-217ENST00000576353 OR7C2O60412 319 aa16.89■□□□□ 0.29
SNF8-217ENST00000576353 TSPOP30536 169 aa16.89■□□□□ 0.29
SNF8-217ENST00000576353 CDKN1BP46527 198 aa16.89■□□□□ 0.29
SNF8-217ENST00000576353 TAS2R45P59539 299 aa16.89■□□□□ 0.29
SNF8-217ENST00000576353 ACOT6Q3I5F7 207 aaPredicted RBP16.89■□□□□ 0.29
SNF8-217ENST00000576353 RNF141Q8WVD5 230 aa16.89■□□□□ 0.29
SNF8-217ENST00000576353 TRAV12-2A0A075B6T6 113 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 FXYD6-FXYD2A0A087WZ82 144 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 OR10J4P0C629 311 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 SPART-AS1P0CW21 52 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 M6PRP20645 277 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 EMP1P54849 157 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 KHDC3LQ587J8 217 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 FXYD5Q96DB9 178 aa16.88■□□□□ 0.29
SNF8-217ENST00000576353 TEX48A0A1B0GUV7 120 aa16.87■□□□□ 0.29
SNF8-217ENST00000576353 LOC102723971A0A1B0GUV8 181 aa16.87■□□□□ 0.29
SNF8-217ENST00000576353 TMEM256Q8N2U0 113 aa16.87■□□□□ 0.29
SNF8-217ENST00000576353 EXOC3-AS1Q8N2X6 119 aa16.87■□□□□ 0.29
SNF8-217ENST00000576353 RPP25LQ8N5L8 163 aaKnown RBP16.87■□□□□ 0.29
SNF8-217ENST00000576353 C2CD4CQ8TF44 421 aa16.87■□□□□ 0.29
SNF8-217ENST00000576353 CELA1Q9UNI1 258 aa16.87■□□□□ 0.29
SNF8-217ENST00000576353 NPIPB6E9PJ23 425 aa16.86■□□□□ 0.29
SNF8-217ENST00000576353 M0R3E3 92 aa16.86■□□□□ 0.29
SNF8-217ENST00000576353 ICAM4Q14773 271 aa16.86■□□□□ 0.29
SNF8-217ENST00000576353 HSD17B11Q8NBQ5 300 aa16.86■□□□□ 0.29
SNF8-217ENST00000576353 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
SNF8-217ENST00000576353 TRAV10A0A0B4J240 114 aa16.85■□□□□ 0.29
SNF8-217ENST00000576353 A0A1W2PPV4 95 aa16.85■□□□□ 0.29
SNF8-217ENST00000576353 C12orf74Q32Q52 190 aa16.85■□□□□ 0.29
SNF8-217ENST00000576353 Q6ZTC4 211 aa16.85■□□□□ 0.29
SNF8-217ENST00000576353 ODF3Q96PU9 254 aa16.85■□□□□ 0.29
SNF8-217ENST00000576353 LINC01587Q99440 93 aa16.85■□□□□ 0.29
SNF8-217ENST00000576353 CT45A10P0DMU9 189 aa16.84■□□□□ 0.29
SNF8-217ENST00000576353 UBE2L3P68036 154 aaKnown RBP16.84■□□□□ 0.29
SNF8-217ENST00000576353 LYPD1Q8N2G4 141 aa16.84■□□□□ 0.29
SNF8-217ENST00000576353 OR2G3Q8NGZ4 309 aa16.84■□□□□ 0.29
SNF8-217ENST00000576353 ZNF503Q96F45 646 aa16.84■□□□□ 0.29
SNF8-217ENST00000576353 LINC00477Q96M19 166 aa16.84■□□□□ 0.29
SNF8-217ENST00000576353 C20orf144Q9BQM9 153 aa16.84■□□□□ 0.29
SNF8-217ENST00000576353 PSMG3Q9BT73 122 aaPredicted RBP16.84■□□□□ 0.29
SNF8-217ENST00000576353 ZNF705GA8MUZ8 300 aaPredicted RBP16.83■□□□□ 0.28
SNF8-217ENST00000576353 LEPP41159 167 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 TCTAP57738 103 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 RAB2AP61019 212 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 OR10G4Q8NGN3 311 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 OR10G9Q8NGN4 311 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 OR10G7Q8NGN6 311 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 DKK2Q9UBU2 259 aa16.83■□□□□ 0.28
SNF8-217ENST00000576353 YTHDF2Q9Y5A9 579 aaKnown RBP16.83■□□□□ 0.28
SNF8-217ENST00000576353 BORCS7-ASMTA0A0B4J1R7 106 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 RNF222A6NCQ9 220 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 ATP6V0CP27449 155 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 TAS2R60P59551 318 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 SERF2P84101 59 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 FAM222AQ5U5X8 452 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 FAM122CQ6P4D5 195 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 PQLC2Q6ZP29 291 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 PHYHIPLQ96FC7 376 aa16.82■□□□□ 0.28
SNF8-217ENST00000576353 MBP02144 154 aa16.81■□□□□ 0.28
SNF8-217ENST00000576353 RANP62826 216 aaKnown RBP16.81■□□□□ 0.28
SNF8-217ENST00000576353 ZNF767PQ75MW2 155 aa16.81■□□□□ 0.28
SNF8-217ENST00000576353 GNPNAT1Q96EK6 184 aaPredicted RBP16.81■□□□□ 0.28
SNF8-217ENST00000576353 G3V3Q6 166 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 H7BYZ3 331 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 CSN1S1P47710 185 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 ERCC8Q13216 396 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 C9orf47Q6ZRZ4 202 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 LINC00476Q8WZB0 136 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 NIPSNAP3BQ9BS92 247 aa16.8■□□□□ 0.28
SNF8-217ENST00000576353 DEFB131BA0A096LNP1 70 aa16.79■□□□□ 0.28
SNF8-217ENST00000576353 IGLL5B9A064 214 aa16.79■□□□□ 0.28
SNF8-217ENST00000576353 GFI1BQ5VTD9 330 aa16.79■□□□□ 0.28
SNF8-217ENST00000576353 RPL7L1Q6DKI1 246 aaKnown RBP16.79■□□□□ 0.28
SNF8-217ENST00000576353 AGPAT4-IT1Q9H0P7 198 aa16.79■□□□□ 0.28
SNF8-217ENST00000576353 Q9H3A6 140 aa16.79■□□□□ 0.28
SNF8-217ENST00000576353 RYR3Q15413 4870 aa16.78■□□□□ 0.28
SNF8-217ENST00000576353 ARPC5O15511 151 aa16.78■□□□□ 0.28
SNF8-217ENST00000576353 PRM2P04554 102 aa16.78■□□□□ 0.28
SNF8-217ENST00000576353 HTN1P15515 57 aa16.78■□□□□ 0.28
SNF8-217ENST00000576353 CDC34P49427 236 aaPredicted RBP16.78■□□□□ 0.28
SNF8-217ENST00000576353 KIR3DS1Q14943 382 aa16.78■□□□□ 0.28
SNF8-217ENST00000576353 TMEM78Q5T7P6 136 aa16.78■□□□□ 0.28
SNF8-217ENST00000576353 J3KRW8 73 aa16.77■□□□□ 0.28
SNF8-217ENST00000576353 TAAR5O14804 337 aa16.77■□□□□ 0.28
SNF8-217ENST00000576353 EIF3GO75821 320 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNF8-217ENST00000576353 LY6G6CO95867 125 aa16.77■□□□□ 0.28
SNF8-217ENST00000576353 SLC25A5P05141 298 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms