RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 COL6A6A6NMZ7 2263 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 TLN1Q9Y490 2541 aaKnown RBP11.52□□□□□ -0.57
SCARF1-209ENST00000576012 H3BMG7 143 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.57
SCARF1-209ENST00000576012 VMA21Q3ZAQ7 101 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 FBXL15Q9H469 300 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 ZNF492Q9P255 531 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 SLC25A15Q9Y619 301 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 IGKV2-40A0A087WW87 121 aaPredicted RBP11.52□□□□□ -0.57
SCARF1-209ENST00000576012 IGKV2D-40P01614 121 aaPredicted RBP11.52□□□□□ -0.57
SCARF1-209ENST00000576012 IGHV3-23P01764 117 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 TMEM167AQ8TBQ9 72 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 RASL11BQ9BPW5 248 aa11.52□□□□□ -0.57
SCARF1-209ENST00000576012 NPIPB5A8MRT5 1133 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 IGLV1-44P01699 117 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 ABHD17AQ96GS6 310 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 SPRY4Q9C004 299 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 LRBAP50851 2863 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 ATP5G2Q06055 141 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
SCARF1-209ENST00000576012 CT83Q5H943 113 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 TMEM160Q9NX00 188 aa11.51□□□□□ -0.57
SCARF1-209ENST00000576012 NDUFS7O75251 213 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 COX7A1P24310 79 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 ORMDL3Q8N138 153 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 THAP8Q8NA92 274 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 GFRA4Q9GZZ7 299 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 TRAV26-1A0A087WT03 109 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 TMEM189A5PLL7 270 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 CDX4O14627 284 aaPredicted RBP11.5□□□□□ -0.57
SCARF1-209ENST00000576012 HBDP02042 147 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 INSL3P51460 131 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 DEFB104AQ8WTQ1 72 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 AGRNO00468 2067 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 CNIH1O95406 144 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 IGLV2-23P01705 113 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 CRYGCP07315 174 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 CD59P13987 128 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 OTORQ9NRC9 128 aa11.5□□□□□ -0.57
SCARF1-209ENST00000576012 FCN3O75636 299 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 IL4P05112 153 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 CEACAM3P40198 252 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 ZNF474Q6S9Z5 364 aaPredicted RBP11.49□□□□□ -0.57
SCARF1-209ENST00000576012 FAM169BQ8N8A8 192 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 ATP6V0BQ99437 205 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 SIGMAR1Q99720 223 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 ASH1LQ9NR48 2969 aaKnown RBP11.49□□□□□ -0.57
SCARF1-209ENST00000576012 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 LEPP41159 167 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 FOXC2Q99958 501 aa11.49□□□□□ -0.57
SCARF1-209ENST00000576012 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 GLRXP35754 106 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 ORM1P02763 201 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 CHAC1Q9BUX1 264 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 LINC00312Q9Y6C7 94 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 PRR33A8MZF0 331 aa11.48□□□□□ -0.57
SCARF1-209ENST00000576012 ATP5IP56385 69 aaPredicted RBP11.48□□□□□ -0.57
SCARF1-209ENST00000576012 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 NGBQ9NPG2 151 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 RAI1Q7Z5J4 1906 aaPredicted RBP11.47□□□□□ -0.57
SCARF1-209ENST00000576012 A0A1B0GW15 77 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 OVOL3O00110 214 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 ZC2HC1BQ5TFG8 222 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 OR5A1Q8NGJ0 315 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 OR9G4Q8NGQ1 327 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 TRGV9Q99603 122 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
SCARF1-209ENST00000576012 IGF2RP11717 2491 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 K7EQM0 130 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 LGALS9BQ3B8N2 356 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 LGALS9CQ6DKI2 356 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 SPXQ9BT56 116 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 DKK4Q9UBT3 224 aa11.47□□□□□ -0.57
SCARF1-209ENST00000576012 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
SCARF1-209ENST00000576012 SH2D1AO60880 128 aa11.46□□□□□ -0.57
SCARF1-209ENST00000576012 HERV-K104P63124 156 aa11.46□□□□□ -0.57
SCARF1-209ENST00000576012 DEFB109BQ30KR1 87 aa11.46□□□□□ -0.57
SCARF1-209ENST00000576012 ZNF292O60281 2723 aa11.46□□□□□ -0.58
SCARF1-209ENST00000576012 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 SEM1Q6ZVN7 128 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 VGLL1Q99990 258 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 TRBV19A0A075B6N1 114 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 TRAV40A0A0B4J280 105 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 LYNX1G3V0Z9 82 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 ZNF883P0CG24 379 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 LYNX1P0DP58 116 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 SPRY2O43597 315 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 NDUFA3O95167 84 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 TGFAP01135 160 aa11.45□□□□□ -0.58
SCARF1-209ENST00000576012 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms