RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TRBV6-1A0A0K0K1D8 114 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 CDX4O14627 284 aaPredicted RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 NBR2O15453 112 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 PRSS1P07477 247 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 CD24P25063 80 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 PSMB8P28062 276 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 CDAP32320 146 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 DUTP33316 252 aaKnown RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 EIF4EBP1Q13541 118 aaPredicted RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 LINC00643Q86TS7 51 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 RPS19BP1Q86WX3 136 aaKnown RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 PRIMA1Q86XR5 153 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 NDUFA11Q86Y39 141 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 FAM90A1Q86YD7 464 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 LINC00527Q9UJ94 153 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 NOTCH4Q99466 2003 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 TRIOO75962 3097 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 C5orf63A6NC05 138 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 TMEM150CB9EJG8 249 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 ENSAO43768 121 aaKnown RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 CLPSP04118 112 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 EDN2P20800 178 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 CRYGSP22914 178 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 AAED1Q7RTV5 226 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 C1orf159Q96HA4 380 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 FAM173AQ9BQD7 235 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 EMC6Q9BV81 110 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 PHPT1Q9NRX4 125 aaPredicted RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 KLF13Q9Y2Y9 288 aaPredicted RBP6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 CACNA1IQ9P0X4 2223 aa6.29□□□□□ -1.4
TOM1L1-220ENST00000575333 ARID1BQ8NFD5 2236 aaPredicted RBP6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 J3QQQ9 107 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 COX6A1P12074 109 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 PFN2P35080 140 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 MYCNOSP40205 109 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 EFNA4P52798 201 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 ZNF816Q0VGE8 651 aaPredicted RBP6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 HES3Q5TGS1 186 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 MAPKAPK5-AS1Q8N8E1 139 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 ZNF441Q8N8Z8 693 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 ZNF714Q96N38 554 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 RTL8AQ9BWD3 113 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 KLK5Q9Y337 293 aaPredicted RBP6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 MUC3AQ02505 3323 aa6.28□□□□□ -1.4
TOM1L1-220ENST00000575333 LINC01548A6NM66 108 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 D6R8Y8 96 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 LY6LH3BQJ8 138 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 K7EMI3 77 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 LOXL1Q08397 574 aaPredicted RBP6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 FAM104BQ5XKR9 115 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 FLVCR1-AS1Q8TAF5 88 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 ITLN1Q8WWA0 313 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 FAM167A-AS1Q96KT0 104 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 SHANK2-AS3Q9BTD1 123 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 PAXXQ9BUH6 204 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 AGPAT4-IT1Q9H0P7 198 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 SIRPDQ9H106 197 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 TP53TG1Q9Y2A0 90 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 TNRC6BQ9UPQ9 1833 aaKnown RBP6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 COL8A2P25067 703 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 FKBP2P26885 142 aaKnown RBP6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 ERVK-16P61578 105 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 ZNF672Q499Z4 452 aaPredicted RBP6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 RNF152Q8N8N0 203 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 FOXC2Q99958 501 aa6.27□□□□□ -1.41
TOM1L1-220ENST00000575333 AGRNO00468 2067 aa6.26□□□□□ -1.41
TOM1L1-220ENST00000575333 LOXL3P58215 753 aa6.26□□□□□ -1.41
TOM1L1-220ENST00000575333 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
TOM1L1-220ENST00000575333 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
TOM1L1-220ENST00000575333 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
TOM1L1-220ENST00000575333 LOC389332A0A1B0GUA5 103 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 ZNF785A8K8V0 405 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 MRPS12O15235 138 aaKnown RBP6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 NDUFC2O95298 119 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 SLC25A16P16260 332 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 CCL11P51671 97 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 CCL8P80075 99 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 APRG1Q8IVJ8 170 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 NABP1Q96AH0 204 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 BDP1A6H8Y1 2624 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 TANC2Q9HCD6 1990 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 PGPA6NDG6 321 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 C17orf98A8MV24 154 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 ARMS2P0C7Q2 107 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 NXPH1P58417 271 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 SPINK9Q5DT21 86 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 FAM27BQ5VT28 67 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 ZNF497Q6ZNH5 498 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 LINC00336Q6ZUF6 198 aa6.25□□□□□ -1.41
TOM1L1-220ENST00000575333 PRDM14Q9GZV8 571 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms