RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PRELID1Q9Y255 219 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 LCE6AA0A183 80 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 OR7C2O60412 319 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 SNRPCP09234 159 aaKnown RBP8.08□□□□□ -1.12
CHD3-216ENST00000573936 NBEAP1P0C6P0 100 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 PYYP10082 97 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 RAB2AP61019 212 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 DEFB135Q30KP9 77 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 PQLC2Q6ZP29 291 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 RNF182Q8N6D2 247 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 OR4B1Q8NGF8 309 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 RNF141Q8WVD5 230 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 RETNQ9HD89 108 aa8.08□□□□□ -1.12
CHD3-216ENST00000573936 A8MTW9 85 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 H3BTX0 84 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 AMBPP02760 352 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 CDC34P49427 236 aaPredicted RBP8.07□□□□□ -1.12
CHD3-216ENST00000573936 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 EIF5AL1Q6IS14 154 aaKnown RBP8.07□□□□□ -1.12
CHD3-216ENST00000573936 FAM122CQ6P4D5 195 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 ALKAL2Q6UX46 152 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 LYPD1Q8N2G4 141 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 OR8A1Q8NGG7 326 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 BLNKQ8WV28 456 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 RPUSD4Q96CM3 377 aaKnown RBP8.07□□□□□ -1.12
CHD3-216ENST00000573936 MRPL53Q96EL3 112 aaKnown RBP8.07□□□□□ -1.12
CHD3-216ENST00000573936 PHYHIPLQ96FC7 376 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 AAMDCQ9H7C9 122 aa8.07□□□□□ -1.12
CHD3-216ENST00000573936 F6UB75 175 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 SLC17A3O00476 420 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 IGKV3-20P01619 116 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 HLA-DMBP28068 263 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 DEFB1P60022 68 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 FAM74A1Q5RGS3 127 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 TEX261Q6UWH6 196 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 FXYD5Q96DB9 178 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 RARRES2Q99969 163 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 ACTR3CQ9C0K3 210 aaPredicted RBP8.06□□□□□ -1.12
CHD3-216ENST00000573936 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
CHD3-216ENST00000573936 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
CHD3-216ENST00000573936 UMAD1C9J7I0 102 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 NDUFB4O95168 129 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 GIG44P09565 113 aaPredicted RBP8.05□□□□□ -1.12
CHD3-216ENST00000573936 OR10J4P0C629 311 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 FHITP49789 147 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 SULT1A2P50226 295 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 CNN1P51911 297 aaKnown RBP8.05□□□□□ -1.12
CHD3-216ENST00000573936 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
CHD3-216ENST00000573936 IFITM2Q01629 132 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 HIST1H1AQ02539 215 aaPredicted RBP8.05□□□□□ -1.12
CHD3-216ENST00000573936 ZNF726P1Q15940 193 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 SSX7Q7RTT5 188 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 RPP25LQ8N5L8 163 aaKnown RBP8.05□□□□□ -1.12
CHD3-216ENST00000573936 ZNF680Q8NEM1 530 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 OR11H2Q8NH07 326 aa8.05□□□□□ -1.12
CHD3-216ENST00000573936 ZNF705FA8MVS1 300 aaPredicted RBP8.04□□□□□ -1.12
CHD3-216ENST00000573936 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHD3-216ENST00000573936 CXorf1O96002 111 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 CSN1S1P47710 185 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 ZNF503Q96F45 646 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 XCL2Q9UBD3 114 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 ALMS1Q8TCU4 4167 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 HYDINQ4G0P3 5121 aa8.04□□□□□ -1.12
CHD3-216ENST00000573936 IFNA7P01567 189 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 ZNF705DP0CH99 300 aaPredicted RBP8.03□□□□□ -1.12
CHD3-216ENST00000573936 ZNF705BP0CI00 300 aaPredicted RBP8.03□□□□□ -1.12
CHD3-216ENST00000573936 RAB5CP51148 216 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 FXYD7P58549 80 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 ICAM4Q14773 271 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 AMTNQ6UX39 209 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 DPPA3Q6W0C5 159 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 EXOC3-AS1Q8N2X6 119 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 CSNK1G2-AS1Q8NCQ2 148 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 FAM213BQ8TBF2 198 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 LINC00477Q96M19 166 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 SLC35B3Q9H1N7 401 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 EDA2RQ9HAV5 297 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 GOLT1BQ9Y3E0 138 aa8.03□□□□□ -1.12
CHD3-216ENST00000573936 CTXND1A0A1B0GTU2 59 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 ZNF705EA8MWA4 302 aaPredicted RBP8.02□□□□□ -1.13
CHD3-216ENST00000573936 HMGB3O15347 200 aaKnown RBP8.02□□□□□ -1.13
CHD3-216ENST00000573936 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 MIFP14174 115 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 TSPOP30536 169 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 RANP62826 216 aaKnown RBP8.02□□□□□ -1.13
CHD3-216ENST00000573936 ARL6IP6Q8N6S5 226 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 RXFP4Q8TDU9 374 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 IGF2BP2-AS1Q96M15 143 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 ODF3Q96PU9 254 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 Q9H3A6 140 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 TMEM167BQ9NRX6 74 aa8.02□□□□□ -1.13
CHD3-216ENST00000573936 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms