RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 LRRC20Q8TCA0 184 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 MARVELD1Q9BSK0 173 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
SMG6-214ENST00000573827 OR5AC2Q9NZP5 309 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 NDUFB4O95168 129 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 FGF7P21781 194 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 CDKN1BP46527 198 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 H2BFSP57053 126 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 TAS2R60P59551 318 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 BAXQ07812 192 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 PFDN5Q99471 154 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 NPCDR1Q9BY65 106 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 NMES1Q9C002 83 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 TMEM14CQ9P0S9 112 aa12.29□□□□□ -0.44
SMG6-214ENST00000573827 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 INMT-MINDY4F8WBC2 141 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 PRAF2O60831 178 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 ZNF253O75346 499 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 CT45A10P0DMU9 189 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 DAD1P61803 113 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 GUK1Q16774 197 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 RNASE8Q8TDE3 154 aaKnown RBP12.28□□□□□ -0.44
SMG6-214ENST00000573827 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
SMG6-214ENST00000573827 RYR1P21817 5038 aa12.28□□□□□ -0.44
SMG6-214ENST00000573827 TRBV19A0A075B6N1 114 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 MPDU1O75352 247 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 FCN2Q15485 313 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 GFI1BQ5VTD9 330 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 OR5C1Q8NGR4 320 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 FAM167A-AS1Q96KT0 104 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 LINC01587Q99440 93 aa12.27□□□□□ -0.45
SMG6-214ENST00000573827 E5RGE8 158 aa12.26□□□□□ -0.45
SMG6-214ENST00000573827 HTN3P15516 51 aa12.26□□□□□ -0.45
SMG6-214ENST00000573827 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
SMG6-214ENST00000573827 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
SMG6-214ENST00000573827 PCLOQ9Y6V0 5065 aa12.26□□□□□ -0.45
SMG6-214ENST00000573827 LRP1BQ9NZR2 4599 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 H7BYZ3 331 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 M0R3E3 92 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 PYYP10082 97 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 HIST1H1EP10412 219 aaKnown RBP12.25□□□□□ -0.45
SMG6-214ENST00000573827 Q6ZR54 194 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 LINC00612Q8N6U2 182 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 MRPL53Q96EL3 112 aaKnown RBP12.25□□□□□ -0.45
SMG6-214ENST00000573827 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 SLC25A2Q9BXI2 301 aa12.25□□□□□ -0.45
SMG6-214ENST00000573827 A0A1B0GVY2 172 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 RTL8CO15255 209 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 LRRC37A5PQ49AS3 106 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 ZNF493Q6ZR52 646 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 OR10J6PQ8NGY7 276 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 C16orf74Q96GX8 76 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
SMG6-214ENST00000573827 DEFB130BP0DP73 79 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 PDE6HQ13956 83 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 CLINT1Q14677 625 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 RNF212Q495C1 297 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
SMG6-214ENST00000573827 PPP1R1CQ8WVI7 109 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 WDR61Q9GZS3 305 aaKnown RBP12.23□□□□□ -0.45
SMG6-214ENST00000573827 SLC25A31Q9H0C2 315 aa12.23□□□□□ -0.45
SMG6-214ENST00000573827 CYCSP99999 105 aaKnown RBP12.22□□□□□ -0.45
SMG6-214ENST00000573827 CBY3A6NI87 242 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 KLLNB2CW77 178 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 MPC2O95563 127 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 RLN2P04090 185 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 ERCC8Q13216 396 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 EXOC3-AS1Q8N2X6 119 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 FXYD5Q96DB9 178 aa12.21□□□□□ -0.45
SMG6-214ENST00000573827 NOP10Q9NPE3 64 aaKnown RBP12.21□□□□□ -0.45
SMG6-214ENST00000573827 TIMM8BQ9Y5J9 83 aaPredicted RBP12.21□□□□□ -0.45
SMG6-214ENST00000573827 HTN1P15515 57 aa12.2□□□□□ -0.46
SMG6-214ENST00000573827 LINC00336Q6ZUF6 198 aa12.2□□□□□ -0.46
SMG6-214ENST00000573827 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
SMG6-214ENST00000573827 ZNF503Q96F45 646 aa12.2□□□□□ -0.46
SMG6-214ENST00000573827 AGPAT4-IT1Q9H0P7 198 aa12.2□□□□□ -0.46
SMG6-214ENST00000573827 DNAH5Q8TE73 4624 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 M0R2N4 97 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 ZNF324O75467 553 aaPredicted RBP12.19□□□□□ -0.46
SMG6-214ENST00000573827 ATP5G1P05496 136 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 LEPP41159 167 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 ATP5G3P48201 142 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 PRELID1Q9Y255 219 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 HSPB11Q9Y547 144 aa12.19□□□□□ -0.46
SMG6-214ENST00000573827 HSPG2P98160 4391 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 F5H768 121 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 CRISP2P16562 243 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 C9orf47Q6ZRZ4 202 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 BLNKQ8WV28 456 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 ATP5SQ99766 215 aa12.18□□□□□ -0.46
SMG6-214ENST00000573827 FUT9Q9Y231 359 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms