RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 RETNQ9HD89 108 aa12.62□□□□□ -0.39
LITAF-212ENST00000573332 HUWE1Q7Z6Z7 4374 aaKnown RBP12.62□□□□□ -0.39
LITAF-212ENST00000573332 COL7A1Q02388 2944 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 CNN1P51911 297 aaKnown RBP12.61□□□□□ -0.39
LITAF-212ENST00000573332 CD300CQ08708 224 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 AMTNQ6UX39 209 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 BAP18Q8IXM2 172 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 OR4B1Q8NGF8 309 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 STOML3Q8TAV4 291 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 AAMDCQ9H7C9 122 aa12.61□□□□□ -0.39
LITAF-212ENST00000573332 ZNF705FA8MVS1 300 aaPredicted RBP12.6□□□□□ -0.39
LITAF-212ENST00000573332 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
LITAF-212ENST00000573332 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
LITAF-212ENST00000573332 CSNK1G2-AS1Q8NCQ2 148 aa12.6□□□□□ -0.39
LITAF-212ENST00000573332 SUN5Q8TC36 379 aa12.6□□□□□ -0.39
LITAF-212ENST00000573332 PHYHIPLQ96FC7 376 aa12.6□□□□□ -0.39
LITAF-212ENST00000573332 CTXND1A0A1B0GTU2 59 aa12.59□□□□□ -0.39
LITAF-212ENST00000573332 IGKV3-20P01619 116 aa12.59□□□□□ -0.39
LITAF-212ENST00000573332 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
LITAF-212ENST00000573332 ZNF726P1Q15940 193 aa12.59□□□□□ -0.39
LITAF-212ENST00000573332 ZFP69Q49AA0 526 aa12.59□□□□□ -0.39
LITAF-212ENST00000573332 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
LITAF-212ENST00000573332 UMAD1C9J7I0 102 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 PRAC2D3DTV9 90 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 M0R3E3 92 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
LITAF-212ENST00000573332 CXorf1O96002 111 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 AMBPP02760 352 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 ZNF705DP0CH99 300 aaPredicted RBP12.58□□□□□ -0.4
LITAF-212ENST00000573332 ZNF705BP0CI00 300 aaPredicted RBP12.58□□□□□ -0.4
LITAF-212ENST00000573332 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
LITAF-212ENST00000573332 ICAM4Q14773 271 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 C9orf62Q8N4C0 152 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 AGRNO00468 2067 aa12.58□□□□□ -0.4
LITAF-212ENST00000573332 GCHFRP30047 84 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 RANP62826 216 aaKnown RBP12.57□□□□□ -0.4
LITAF-212ENST00000573332 SSX7Q7RTT5 188 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 ARL6IP6Q8N6S5 226 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 Q9H3A6 140 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 EDA2RQ9HAV5 297 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 TMEM167BQ9NRX6 74 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
LITAF-212ENST00000573332 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
LITAF-212ENST00000573332 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
LITAF-212ENST00000573332 SLC51BQ86UW2 128 aa12.56□□□□□ -0.4
LITAF-212ENST00000573332 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
LITAF-212ENST00000573332 RARRES2Q99969 163 aa12.56□□□□□ -0.4
LITAF-212ENST00000573332 OTORQ9NRC9 128 aa12.56□□□□□ -0.4
LITAF-212ENST00000573332 XCL2Q9UBD3 114 aa12.56□□□□□ -0.4
LITAF-212ENST00000573332 BOLA2-SMG1P6H3BVE0 249 aa12.55□□□□□ -0.4
LITAF-212ENST00000573332 EIF5AL1Q6IS14 154 aaKnown RBP12.55□□□□□ -0.4
LITAF-212ENST00000573332 DPPA3Q6W0C5 159 aa12.55□□□□□ -0.4
LITAF-212ENST00000573332 OR11H2Q8NH07 326 aa12.55□□□□□ -0.4
LITAF-212ENST00000573332 RXFP4Q8TDU9 374 aa12.55□□□□□ -0.4
LITAF-212ENST00000573332 ODF3Q96PU9 254 aa12.55□□□□□ -0.4
LITAF-212ENST00000573332 NBEAL2Q6ZNJ1 2754 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 FXYD7P58549 80 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 FAM74A1Q5RGS3 127 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 ZNF705AQ6ZN79 300 aaPredicted RBP12.54□□□□□ -0.4
LITAF-212ENST00000573332 C9orf47Q6ZRZ4 202 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 TMED6Q8WW62 240 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 IGF2BP2-AS1Q96M15 143 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
LITAF-212ENST00000573332 TENM3Q9P273 2699 aa12.53□□□□□ -0.4
LITAF-212ENST00000573332 RBAKDNA6NC62 111 aa12.53□□□□□ -0.4
LITAF-212ENST00000573332 PGPA6NDG6 321 aa12.53□□□□□ -0.4
LITAF-212ENST00000573332 CRXO43186 299 aaPredicted RBP12.53□□□□□ -0.4
LITAF-212ENST00000573332 SLC25A5P05141 298 aaKnown RBP12.53□□□□□ -0.4
LITAF-212ENST00000573332 PRB4P10163 310 aaPredicted RBP12.53□□□□□ -0.4
LITAF-212ENST00000573332 CSN1S1P47710 185 aa12.53□□□□□ -0.4
LITAF-212ENST00000573332 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
LITAF-212ENST00000573332 PPP1R14DQ9NXH3 145 aa12.53□□□□□ -0.4
LITAF-212ENST00000573332 MAP1LC3B2A6NCE7 125 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 M0R2Z0 102 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 CT45A10P0DMU9 189 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 CDKN1BP46527 198 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 FHITP49789 147 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 RAB5CP51148 216 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 NEU1Q99519 415 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 MAP1LC3BQ9GZQ8 125 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 AGPAT4-IT1Q9H0P7 198 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 X6R8D5 127 aa12.52□□□□□ -0.41
LITAF-212ENST00000573332 A0A1W2PRE2 83 aa12.51□□□□□ -0.41
LITAF-212ENST00000573332 MIFP14174 115 aa12.51□□□□□ -0.41
LITAF-212ENST00000573332 TSPOP30536 169 aa12.51□□□□□ -0.41
LITAF-212ENST00000573332 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
LITAF-212ENST00000573332 FAM19A4Q96LR4 140 aa12.51□□□□□ -0.41
LITAF-212ENST00000573332 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
LITAF-212ENST00000573332 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
LITAF-212ENST00000573332 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
LITAF-212ENST00000573332 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
LITAF-212ENST00000573332 ERCC8Q13216 396 aa12.5□□□□□ -0.41
LITAF-212ENST00000573332 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
LITAF-212ENST00000573332 FAM213BQ8TBF2 198 aa12.5□□□□□ -0.41
LITAF-212ENST00000573332 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
LITAF-212ENST00000573332 IGKV2-40A0A087WW87 121 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms