RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 SYNGR2O43760 224 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 FXYD7P58549 80 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 DAD1P61803 113 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 AKR1C1Q04828 323 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 OR2F1Q13607 317 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 FAM222AQ5U5X8 452 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 FAM78BQ5VT40 261 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 GSG1LQ6UXU4 331 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 ZNF709Q8N972 641 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 THAP8Q8NA92 274 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 C15orf53Q8NAA6 179 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 SLC25A22Q9H936 323 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 WRBO00258 174 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 SOCS3O14543 225 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 PITX3O75364 302 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 INSP01308 110 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 IAPPP10997 89 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 HTN3P15516 51 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 INPP1P49441 399 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
CIITA-208ENST00000572665 ZNF846Q147U1 533 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 GDF5OSQ5U4N7 250 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 IGF2BP2-AS1Q96M15 143 aa6.57□□□□□ -1.36
CIITA-208ENST00000572665 STRAPQ9Y3F4 350 aaKnown RBP6.57□□□□□ -1.36
CIITA-208ENST00000572665 YTHDF2Q9Y5A9 579 aaKnown RBP6.57□□□□□ -1.36
CIITA-208ENST00000572665 ZNF98A6NK75 572 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 LYRM9A8MSI8 78 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 CENPXA8MT69 81 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 M0R2N4 97 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 LYRM1O43325 122 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 UPK1BO75841 260 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 NDUFB6O95139 128 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 RPL7P18124 248 aaKnown RBP6.56□□□□□ -1.36
CIITA-208ENST00000572665 ORM2P19652 201 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 UBE2MP61081 183 aaKnown RBP6.56□□□□□ -1.36
CIITA-208ENST00000572665 SELENOTP62341 195 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 IFITM3Q01628 133 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 SPANXN5Q5MJ07 72 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 ATG101Q9BSB4 218 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 RSG1Q9BU20 258 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 SLC35B3Q9H1N7 401 aa6.56□□□□□ -1.36
CIITA-208ENST00000572665 SFT2D2O95562 160 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 IL5P05113 134 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 FGL1Q08830 312 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 ASAH1Q13510 395 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 TMEM144Q7Z5S9 345 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 TMEM256Q8N2U0 113 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 LRRC20Q8TCA0 184 aa6.55□□□□□ -1.36
CIITA-208ENST00000572665 IGKV1OR2-108A0A075B7D4 117 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 SMCO3A2RU48 225 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 A8MTW9 85 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 F6UB75 175 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 HYPMO75409 117 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 TSPOP30536 169 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 CNN1P51911 297 aaKnown RBP6.54□□□□□ -1.36
CIITA-208ENST00000572665 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 C1orf158Q8N1D5 194 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 ZNF738Q8NE65 137 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 HIGD1AQ9Y241 93 aa6.54□□□□□ -1.36
CIITA-208ENST00000572665 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 A0A1B0GVY2 172 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 FNDC10F2Z333 226 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 BOLA2-SMG1P6H3BVE0 249 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 RTL8CO15255 209 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 OR5G3P0C626 314 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 DEFB1P60022 68 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 RHOBP62745 196 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 PPP1R1AQ13522 171 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 CYP2G1PQ6ZSU1 146 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 ACOT7LQ6ZUV0 252 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 OR11H7Q8NGC8 314 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 SLC25A39Q9BZJ4 359 aaPredicted RBP6.53□□□□□ -1.36
CIITA-208ENST00000572665 NPVFQ9HCQ7 196 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 PSENENQ9NZ42 101 aa6.53□□□□□ -1.36
CIITA-208ENST00000572665 PRSS46E5RG02 174 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 H3BP45 60 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 H3BRN7 92 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 ADAP1O75689 374 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 TCRBP04435 133 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 ATP5G1P05496 136 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 LINC00869P0C866 280 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 CXCL2P19875 107 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 ATP5G3P48201 142 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 CCL18P55774 89 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 PLP1P60201 277 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 ZNF493Q6ZR52 646 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 Q6ZR54 194 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 ZBTB8BQ8NAP8 495 aaPredicted RBP6.52□□□□□ -1.37
CIITA-208ENST00000572665 OR10P1Q8NGE3 313 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 C16orf74Q96GX8 76 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 LINC01587Q99440 93 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 SHANK2-AS3Q9BTD1 123 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 C20orf85Q9H1P6 137 aa6.52□□□□□ -1.37
CIITA-208ENST00000572665 FLVCR2Q9UPI3 526 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms