RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 IGLL5B9A064 214 aa14.43□□□□□ -0.1
NUP88-204ENST00000572290 PRAC2D3DTV9 90 aa14.43□□□□□ -0.1
NUP88-204ENST00000572290 IFNA5P01569 189 aa14.43□□□□□ -0.1
NUP88-204ENST00000572290 OR10J6PQ8NGY7 276 aa14.43□□□□□ -0.1
NUP88-204ENST00000572290 SMIM3Q9BZL3 60 aa14.43□□□□□ -0.1
NUP88-204ENST00000572290 MED28Q9H204 178 aa14.43□□□□□ -0.1
NUP88-204ENST00000572290 TEX48A0A1B0GUV7 120 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 PYYP10082 97 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 FCN2Q15485 313 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 MIR17HGQ75NE6 70 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 SCGB1C1Q8TD33 95 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 SLC25A2Q9BXI2 301 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 DKK2Q9UBU2 259 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 TIMM9Q9Y5J7 89 aa14.42□□□□□ -0.1
NUP88-204ENST00000572290 DEFB131BA0A096LNP1 70 aa14.41□□□□□ -0.1
NUP88-204ENST00000572290 CDKN1BP46527 198 aa14.41□□□□□ -0.1
NUP88-204ENST00000572290 FAM222AQ5U5X8 452 aa14.41□□□□□ -0.1
NUP88-204ENST00000572290 LGALS9CQ6DKI2 356 aa14.41□□□□□ -0.1
NUP88-204ENST00000572290 MRPL32Q9BYC8 188 aaKnown RBP14.41□□□□□ -0.1
NUP88-204ENST00000572290 YTHDF2Q9Y5A9 579 aaKnown RBP14.41□□□□□ -0.1
NUP88-204ENST00000572290 PDE6HQ13956 83 aa14.4□□□□□ -0.1
NUP88-204ENST00000572290 RPP25LQ8N5L8 163 aaKnown RBP14.4□□□□□ -0.1
NUP88-204ENST00000572290 BLNKQ8WV28 456 aa14.4□□□□□ -0.1
NUP88-204ENST00000572290 MRPL53Q96EL3 112 aaKnown RBP14.4□□□□□ -0.1
NUP88-204ENST00000572290 FAM167A-AS1Q96KT0 104 aa14.4□□□□□ -0.1
NUP88-204ENST00000572290 APLNQ9ULZ1 77 aa14.4□□□□□ -0.1
NUP88-204ENST00000572290 FUT9Q9Y231 359 aa14.4□□□□□ -0.1
NUP88-204ENST00000572290 ZNF705GA8MUZ8 300 aaPredicted RBP14.39□□□□□ -0.11
NUP88-204ENST00000572290 NDUFB4O95168 129 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 TMEM256Q8N2U0 113 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 LINC01587Q99440 93 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 NIPSNAP3BQ9BS92 247 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 OR51M1Q9H341 326 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 WFDC1Q9HC57 220 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 PRELID1Q9Y255 219 aa14.39□□□□□ -0.11
NUP88-204ENST00000572290 M0R3E3 92 aa14.38□□□□□ -0.11
NUP88-204ENST00000572290 PRM2P04554 102 aa14.38□□□□□ -0.11
NUP88-204ENST00000572290 TSPOP30536 169 aa14.38□□□□□ -0.11
NUP88-204ENST00000572290 FFAR4Q5NUL3 377 aa14.38□□□□□ -0.11
NUP88-204ENST00000572290 PARD6GQ9BYG4 376 aaPredicted RBP14.38□□□□□ -0.11
NUP88-204ENST00000572290 IGHV4-4A0A075B6R2 117 aa14.37□□□□□ -0.11
NUP88-204ENST00000572290 NPIPB6E9PJ23 425 aa14.37□□□□□ -0.11
NUP88-204ENST00000572290 PAXXQ9BUH6 204 aa14.37□□□□□ -0.11
NUP88-204ENST00000572290 AAMDCQ9H7C9 122 aa14.37□□□□□ -0.11
NUP88-204ENST00000572290 PLA2G2EQ9NZK7 142 aa14.37□□□□□ -0.11
NUP88-204ENST00000572290 NBEAP1P0C6P0 100 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 TAS2R60P59551 318 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 OXA1LQ15070 435 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 EXOC3-AS1Q8N2X6 119 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 RNF141Q8WVD5 230 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 ODF3Q96PU9 254 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 C20orf144Q9BQM9 153 aa14.36□□□□□ -0.11
NUP88-204ENST00000572290 CT45A10P0DMU9 189 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 AZU1P20160 251 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 LEPP41159 167 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 ICAM4Q14773 271 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 KIR3DS1Q14943 382 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 RGS21Q2M5E4 152 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 FXYD5Q96DB9 178 aa14.35□□□□□ -0.11
NUP88-204ENST00000572290 H7BYZ3 331 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 OR7C2O60412 319 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 GIPP09681 153 aaPredicted RBP14.34□□□□□ -0.11
NUP88-204ENST00000572290 OR10J4P0C629 311 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 HTN1P15515 57 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 DAD1P61803 113 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 GFI1BQ5VTD9 330 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 ASB13Q8WXK3 278 aa14.34□□□□□ -0.11
NUP88-204ENST00000572290 EPPK1P58107 5090 aaKnown RBP14.34□□□□□ -0.11
NUP88-204ENST00000572290 LYRM9A8MSI8 78 aa14.33□□□□□ -0.12
NUP88-204ENST00000572290 J3KRW8 73 aa14.33□□□□□ -0.12
NUP88-204ENST00000572290 ERCC8Q13216 396 aa14.33□□□□□ -0.12
NUP88-204ENST00000572290 AQP10Q96PS8 301 aa14.33□□□□□ -0.12
NUP88-204ENST00000572290 VPS13DQ5THJ4 4388 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 TAS2R45P59539 299 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 ZNF266Q14584 549 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 ACOT6Q3I5F7 207 aaPredicted RBP14.32□□□□□ -0.12
NUP88-204ENST00000572290 KHDC3LQ587J8 217 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 Q5BKY6 102 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 FAM122CQ6P4D5 195 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 ZNF503Q96F45 646 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 C16orf74Q96GX8 76 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 LINC00477Q96M19 166 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 NDUFAF3Q9BU61 184 aa14.32□□□□□ -0.12
NUP88-204ENST00000572290 PLAC8L1A1L4L8 177 aa14.31□□□□□ -0.12
NUP88-204ENST00000572290 HTN3P15516 51 aa14.31□□□□□ -0.12
NUP88-204ENST00000572290 M6PRP20645 277 aa14.31□□□□□ -0.12
NUP88-204ENST00000572290 UBE2L3P68036 154 aaKnown RBP14.31□□□□□ -0.12
NUP88-204ENST00000572290 ZNF493Q6ZR52 646 aa14.31□□□□□ -0.12
NUP88-204ENST00000572290 PHYHIPLQ96FC7 376 aa14.31□□□□□ -0.12
NUP88-204ENST00000572290 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
NUP88-204ENST00000572290 FAM210BQ96KR6 192 aa14.3□□□□□ -0.12
NUP88-204ENST00000572290 IGKV2-40A0A087WW87 121 aaPredicted RBP14.29□□□□□ -0.12
NUP88-204ENST00000572290 TRAV12-3A0A0B4J271 114 aa14.29□□□□□ -0.12
NUP88-204ENST00000572290 A0A1W2PPV4 95 aa14.29□□□□□ -0.12
NUP88-204ENST00000572290 EIF3GO75821 320 aaKnown RBP eCLIP14.29□□□□□ -0.12
NUP88-204ENST00000572290 IGKV2D-40P01614 121 aaPredicted RBP14.29□□□□□ -0.12
NUP88-204ENST00000572290 RANP62826 216 aaKnown RBP14.29□□□□□ -0.12
NUP88-204ENST00000572290 C9orf47Q6ZRZ4 202 aa14.29□□□□□ -0.12
NUP88-204ENST00000572290 CCDC28AQ8IWP9 274 aa14.29□□□□□ -0.12
NUP88-204ENST00000572290 LYPD1Q8N2G4 141 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms