RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 LINC00305Q7Z4B0 112 aa13.48□□□□□ -0.25
CCDC40-206ENST00000572083 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-206ENST00000572083 ZNF431Q8TF32 576 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-206ENST00000572083 PAX4O43316 350 aa13.47□□□□□ -0.25
CCDC40-206ENST00000572083 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC40-206ENST00000572083 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
CCDC40-206ENST00000572083 PSENENQ9NZ42 101 aa13.47□□□□□ -0.25
CCDC40-206ENST00000572083 RABL2AQ9UBK7 228 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-206ENST00000572083 IGHV3-53P01767 116 aa13.46□□□□□ -0.25
CCDC40-206ENST00000572083 PPP1R1AQ13522 171 aa13.46□□□□□ -0.25
CCDC40-206ENST00000572083 BPIFA4PQ86YQ2 179 aa13.46□□□□□ -0.25
CCDC40-206ENST00000572083 ZNF680Q8NEM1 530 aa13.46□□□□□ -0.25
CCDC40-206ENST00000572083 SSSCA1O60232 199 aa13.45□□□□□ -0.26
CCDC40-206ENST00000572083 ZNF324O75467 553 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-206ENST00000572083 MORN5Q5VZ52 161 aa13.45□□□□□ -0.26
CCDC40-206ENST00000572083 TEPPQ6URK8 271 aa13.45□□□□□ -0.26
CCDC40-206ENST00000572083 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
CCDC40-206ENST00000572083 RNF24Q9Y225 148 aa13.45□□□□□ -0.26
CCDC40-206ENST00000572083 LY96Q9Y6Y9 160 aa13.45□□□□□ -0.26
CCDC40-206ENST00000572083 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 SFT2D2O95562 160 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 LYPD5Q6UWN5 251 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 LINC00467Q9BRT7 94 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 NPVFQ9HCQ7 196 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 MSRB1Q9NZV6 116 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 RSL24D1Q9UHA3 163 aaKnown RBP13.44□□□□□ -0.26
CCDC40-206ENST00000572083 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
CCDC40-206ENST00000572083 TRAV9-2A0A087WT02 112 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 H3BQ15 152 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 K7EPK0 472 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 METTL15P1P0C7V9 234 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 SMIM18P0DKX4 95 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 IGLC2P0DOY2 106 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 FAUP35544 74 aaKnown RBP13.43□□□□□ -0.26
CCDC40-206ENST00000572083 ST6GAL2Q96JF0 529 aa13.43□□□□□ -0.26
CCDC40-206ENST00000572083 CCDC59Q9P031 241 aaKnown RBP13.43□□□□□ -0.26
CCDC40-206ENST00000572083 GOSR2O14653 212 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 SPINK4O60575 86 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 ID3Q02535 119 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 OPCMLQ14982 345 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 PXDC1Q5TGL8 231 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 WFDC10BQ8IUB3 73 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-206ENST00000572083 MGAT4CQ9UBM8 478 aa13.42□□□□□ -0.26
CCDC40-206ENST00000572083 C7orf71A4D174 169 aa13.41□□□□□ -0.26
CCDC40-206ENST00000572083 SLC25A5P05141 298 aaKnown RBP13.41□□□□□ -0.26
CCDC40-206ENST00000572083 BTN1A1Q13410 526 aa13.41□□□□□ -0.26
CCDC40-206ENST00000572083 ZNF546Q86UE3 836 aa13.41□□□□□ -0.26
CCDC40-206ENST00000572083 EIF4E3Q8N5X7 224 aaKnown RBP13.41□□□□□ -0.26
CCDC40-206ENST00000572083 C8orf49Q96NF6 230 aa13.41□□□□□ -0.26
CCDC40-206ENST00000572083 MRPL16Q9NX20 251 aaKnown RBP13.41□□□□□ -0.26
CCDC40-206ENST00000572083 PRO0255Q9UI72 69 aa13.41□□□□□ -0.26
CCDC40-206ENST00000572083 IGLV5-52A0A0A0MRZ9 124 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 AGPAT2O15120 278 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 PRAF2O60831 178 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 CRYBA4P53673 196 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 TCL1AP56279 114 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 CD300CQ08708 224 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 ERCC8Q13216 396 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 MRPL23Q16540 153 aaKnown RBP13.4□□□□□ -0.26
CCDC40-206ENST00000572083 TMEM14EPQ6UXP3 125 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 MCFD2Q8NI22 146 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 TMEM37Q8WXS4 190 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 TMEM70Q9BUB7 260 aa13.4□□□□□ -0.26
CCDC40-206ENST00000572083 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 ANXA2RQ3ZCQ2 193 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 NEGR1Q7Z3B1 354 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 OR10P1Q8NGE3 313 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 TRIM63Q969Q1 353 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 SMIM8Q96KF7 97 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 HHLA3Q9XRX5 114 aa13.39□□□□□ -0.27
CCDC40-206ENST00000572083 FABP12A6NFH5 140 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 EVI2AP22794 236 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 C10orf113Q5VZT2 155 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 DYNC2LI1Q8TCX1 351 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 MGST2Q99735 147 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 VGLL1Q99990 258 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 SOSTQ9BQB4 213 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 TP53TG3Q9ULZ0 132 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 HMCN2Q8NDA2 5059 aa13.38□□□□□ -0.27
CCDC40-206ENST00000572083 TRAV5A0A0B4J249 113 aa13.37□□□□□ -0.27
CCDC40-206ENST00000572083 KLLNB2CW77 178 aa13.37□□□□□ -0.27
CCDC40-206ENST00000572083 M0R3E3 92 aa13.37□□□□□ -0.27
CCDC40-206ENST00000572083 TNFSF8P32971 234 aa13.37□□□□□ -0.27
CCDC40-206ENST00000572083 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
CCDC40-206ENST00000572083 FHL2Q14192 279 aa13.37□□□□□ -0.27
CCDC40-206ENST00000572083 TOMM5Q8N4H5 51 aa13.37□□□□□ -0.27
CCDC40-206ENST00000572083 SLC25A21Q9BQT8 299 aaPredicted RBP13.37□□□□□ -0.27
CCDC40-206ENST00000572083 E5RGE8 158 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 SCGB1D2O95969 90 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 OR4E1P0C645 316 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 AP3S2P59780 193 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 ARL16Q0P5N6 197 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 SLAQ13239 276 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
CCDC40-206ENST00000572083 FAM30AQ9NZY2 134 aa13.36□□□□□ -0.27
CCDC40-206ENST00000572083 UBR4Q5T4S7 5183 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 K7EQD1 137 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms