RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
RAB40B-206ENST00000571995 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
RAB40B-206ENST00000571995 Q6ZVH6 145 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 BEND2Q8NDZ0 799 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
RAB40B-206ENST00000571995 LOC102724200A0A096LPH7 203 aaPredicted RBP12.78□□□□□ -0.36
RAB40B-206ENST00000571995 NPFFO15130 113 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 FAM71F2Q6NXP2 309 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 OTORQ9NRC9 128 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 IGHV4-61A0A0C4DH41 118 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 hDV102S1A0JD36 115 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 A8MWP6 167 aa12.78□□□□□ -0.36
RAB40B-206ENST00000571995 SP5Q6BEB4 398 aaPredicted RBP12.78□□□□□ -0.36
RAB40B-206ENST00000571995 LINC00173Q6ZV60 143 aa12.77□□□□□ -0.36
RAB40B-206ENST00000571995 FMC1Q96HJ9 113 aa12.77□□□□□ -0.36
RAB40B-206ENST00000571995 TM4SF20Q53R12 229 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 ZNF562Q6V9R5 426 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 ZNF491Q8N8L2 437 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 ZC2HC1AQ96GY0 325 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 AP1S3Q96PC3 154 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 RNF114Q9Y508 228 aa12.77□□□□□ -0.37
RAB40B-206ENST00000571995 SFTPCP11686 197 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 SCGB2A2Q13296 93 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 Q86TA4 180 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 AMN1Q8IY45 258 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 JKAMPQ9P055 326 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 NMUP48645 174 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 YPEL3P61236 119 aaPredicted RBP12.76□□□□□ -0.37
RAB40B-206ENST00000571995 FAM74A4Q5TZK3 123 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 LYZL1Q6UWQ5 148 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 VGLL1Q99990 258 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 BLCAPP62952 87 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 VAMP3Q15836 100 aa12.76□□□□□ -0.37
RAB40B-206ENST00000571995 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 HELZ2Q9BYK8 2649 aaKnown RBP12.75□□□□□ -0.37
RAB40B-206ENST00000571995 IL17RELQ6ZVW7 336 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 SNHG12Q9BXW3 62 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 TRAV30A0A087WSZ9 112 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 COX6B1P14854 86 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 GDF5OSQ5U4N7 250 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 EEF1AKMT3Q96AZ1 226 aa12.75□□□□□ -0.37
RAB40B-206ENST00000571995 I3L2K1 104 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 KLHDC1Q8N7A1 406 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 AP5S1Q9NUS5 200 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 TP53TG3Q9ULZ0 132 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 IGHV3OR16-12A0A075B7B8 117 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 TRBV9A0A0B4J1U6 114 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 SHANK2-AS3Q9BTD1 123 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 CELSR1Q9NYQ6 3014 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 TRBV19A0A075B6N1 114 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 FNDC10F2Z333 226 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 GP9P14770 177 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 THAP8Q8NA92 274 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 IGF2BP2-AS1Q96M15 143 aa12.74□□□□□ -0.37
RAB40B-206ENST00000571995 FLNAP21333 2647 aaKnown RBP12.74□□□□□ -0.37
RAB40B-206ENST00000571995 IGHV4-39P01824 125 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 HOXB4P17483 251 aaPredicted RBP12.73□□□□□ -0.37
RAB40B-206ENST00000571995 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 IGHV4-30-2A0A087WSY4 118 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 F6UB75 175 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 PVRIGQ6DKI7 326 aa12.73□□□□□ -0.37
RAB40B-206ENST00000571995 D6R8Y8 96 aa12.72□□□□□ -0.37
RAB40B-206ENST00000571995 COX19Q49B96 90 aa12.72□□□□□ -0.37
RAB40B-206ENST00000571995 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
RAB40B-206ENST00000571995 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
RAB40B-206ENST00000571995 TOMM40O96008 361 aa12.72□□□□□ -0.37
RAB40B-206ENST00000571995 PRELID3AQ96N28 172 aa12.72□□□□□ -0.37
RAB40B-206ENST00000571995 TMEM70Q9BUB7 260 aa12.72□□□□□ -0.37
RAB40B-206ENST00000571995 IGHV7-81A0A0B4J1V7 117 aa12.71□□□□□ -0.37
RAB40B-206ENST00000571995 TCF21O43680 179 aa12.71□□□□□ -0.37
RAB40B-206ENST00000571995 SH2D1AO60880 128 aa12.71□□□□□ -0.37
RAB40B-206ENST00000571995 LINC00614P0C842 121 aa12.71□□□□□ -0.37
RAB40B-206ENST00000571995 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.37
RAB40B-206ENST00000571995 M0R1W7 72 aa12.71□□□□□ -0.37
RAB40B-206ENST00000571995 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
RAB40B-206ENST00000571995 IGHV2-70DA0A0C4DH43 119 aa12.71□□□□□ -0.38
RAB40B-206ENST00000571995 OVOL3O00110 214 aa12.71□□□□□ -0.38
RAB40B-206ENST00000571995 RNF151Q2KHN1 245 aa12.71□□□□□ -0.38
RAB40B-206ENST00000571995 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.38
RAB40B-206ENST00000571995 HIST2H2BCQ6DN03 193 aa12.71□□□□□ -0.38
RAB40B-206ENST00000571995 FER1L6-AS1Q8NA97 138 aa12.71□□□□□ -0.38
RAB40B-206ENST00000571995 NAA38Q9BRA0 125 aaKnown RBP12.71□□□□□ -0.38
RAB40B-206ENST00000571995 BEX4Q9NWD9 120 aaPredicted RBP12.71□□□□□ -0.38
RAB40B-206ENST00000571995 FAM181BA6NEQ2 426 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
RAB40B-206ENST00000571995 S100A7P31151 101 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 ITPR3Q14573 2671 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 H3BVH4 76 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms