RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
RPAIN-209ENST00000571558 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
RPAIN-209ENST00000571558 ARL2-SNX15V9GYD0 113 aa10.23□□□□□ -0.77
RPAIN-209ENST00000571558 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
RPAIN-209ENST00000571558 A0A1W2PRE2 83 aa10.22□□□□□ -0.77
RPAIN-209ENST00000571558 GGTLC3B5MD39 225 aa10.22□□□□□ -0.77
RPAIN-209ENST00000571558 PAGE4O60829 102 aa10.22□□□□□ -0.77
RPAIN-209ENST00000571558 RPL11P62913 178 aaKnown RBP10.22□□□□□ -0.77
RPAIN-209ENST00000571558 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
RPAIN-209ENST00000571558 FAM210AQ96ND0 272 aa10.22□□□□□ -0.77
RPAIN-209ENST00000571558 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
RPAIN-209ENST00000571558 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 TRAV2A0A0B4J234 112 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 LINC00862A6NCI5 91 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 K7EQG2 157 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 UBE2G2P60604 165 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 RANP62826 216 aaKnown RBP10.21□□□□□ -0.78
RPAIN-209ENST00000571558 RBPMS2Q6ZRY4 209 aaKnown RBP10.21□□□□□ -0.78
RPAIN-209ENST00000571558 CCDC28AQ8IWP9 274 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.78
RPAIN-209ENST00000571558 LOC102723971A0A1B0GUV8 181 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 ISLRO14498 428 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 IFNA1P01562 189 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 BCL2P10415 239 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 HAGHQ16775 308 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 SAMD13Q5VXD3 122 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 IGFL4Q6B9Z1 124 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 SPAG8Q99932 426 aaPredicted RBP10.2□□□□□ -0.78
RPAIN-209ENST00000571558 Q9H3A6 140 aa10.2□□□□□ -0.78
RPAIN-209ENST00000571558 RBFOX3A6NFN3 312 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 ATP5G3P48201 142 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 PSG9Q00887 426 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 ICAM4Q14773 271 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 FAM24BQ8N5W8 94 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 RARRES2Q99969 163 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 OTORQ9NRC9 128 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 VAX2Q9UIW0 290 aa10.19□□□□□ -0.78
RPAIN-209ENST00000571558 PLECQ15149 4684 aaKnown RBP10.19□□□□□ -0.78
RPAIN-209ENST00000571558 TAGLN2P37802 199 aaKnown RBP10.18□□□□□ -0.78
RPAIN-209ENST00000571558 TFPI2P48307 235 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 CD81P60033 236 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 SUMO1P63165 101 aaKnown RBP10.18□□□□□ -0.78
RPAIN-209ENST00000571558 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 SRSF3P84103 164 aaKnown RBP10.18□□□□□ -0.78
RPAIN-209ENST00000571558 LCN12Q6JVE5 192 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 RNF182Q8N6D2 247 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 C16orf92Q96LL3 132 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 C20orf173Q96LM9 149 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 NKX6-2Q9C056 277 aaPredicted RBP10.18□□□□□ -0.78
RPAIN-209ENST00000571558 PCLOQ9Y6V0 5065 aa10.18□□□□□ -0.78
RPAIN-209ENST00000571558 RAB19A4D1S5 217 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 PGPA6NDG6 321 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 C11orf94C9JXX5 98 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 DNASE2O00115 360 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-209ENST00000571558 MEF2BQ02080 365 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-209ENST00000571558 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 WFDC3Q8IUB2 231 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
RPAIN-209ENST00000571558 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 HERC2O95714 4834 aa10.17□□□□□ -0.78
RPAIN-209ENST00000571558 RBMY1BA6NDE4 496 aaKnown RBP10.16□□□□□ -0.78
RPAIN-209ENST00000571558 RBMY1EA6NEQ0 496 aaKnown RBP10.16□□□□□ -0.78
RPAIN-209ENST00000571558 OR4C46A6NHA9 309 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 M0R3E3 92 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 RBMY1DP0C7P1 496 aaKnown RBP10.16□□□□□ -0.78
RPAIN-209ENST00000571558 PSG3Q16557 428 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 RXFP4Q8TDU9 374 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 EIF5A2Q9GZV4 153 aaKnown RBP10.16□□□□□ -0.78
RPAIN-209ENST00000571558 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 CLEC5AQ9NY25 188 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 PRELID1Q9Y255 219 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 C9JQL5 133 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 NDUFS6O75380 124 aaKnown RBP10.16□□□□□ -0.78
RPAIN-209ENST00000571558 ZNF688P0C7X2 276 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 GUCA2BQ16661 112 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 COMMD7Q86VX2 200 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
RPAIN-209ENST00000571558 ARL6IP6Q8N6S5 226 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 C5orf17Q8NAS9 161 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 TCEAL7Q9BRU2 100 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 EPDR1Q9UM22 224 aa10.16□□□□□ -0.78
RPAIN-209ENST00000571558 ZNF705FA8MVS1 300 aaPredicted RBP10.15□□□□□ -0.79
RPAIN-209ENST00000571558 PRAC2D3DTV9 90 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.79
RPAIN-209ENST00000571558 ID1P41134 155 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 SNRPD3P62318 126 aaKnown RBP10.15□□□□□ -0.79
RPAIN-209ENST00000571558 GNG5P63218 68 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 ODF3L2Q3SX64 289 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 LINC00476Q8WZB0 136 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 C11orf52Q96A22 123 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 TUBA4BQ9H853 241 aa10.15□□□□□ -0.79
RPAIN-209ENST00000571558 PDE6DO43924 150 aa10.14□□□□□ -0.79
RPAIN-209ENST00000571558 TCRAP04437 139 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms