RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
SCARF1-204ENST00000570902 H3BRN7 92 aa13.17□□□□□ -0.3
SCARF1-204ENST00000570902 CDKN1BP46527 198 aa13.17□□□□□ -0.3
SCARF1-204ENST00000570902 RAP2BP61225 183 aa13.17□□□□□ -0.3
SCARF1-204ENST00000570902 SHANK2-AS3Q9BTD1 123 aa13.17□□□□□ -0.3
SCARF1-204ENST00000570902 NPVFQ9HCQ7 196 aa13.17□□□□□ -0.3
SCARF1-204ENST00000570902 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 H7BYZ3 331 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 PRAF2O60831 178 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 CAV2P51636 162 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 S100A10P60903 97 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 IL15RAQ13261 267 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 LRRC20Q8TCA0 184 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 UHRF2Q96PU4 802 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
SCARF1-204ENST00000570902 A0A087X0K7 114 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 FNDC10F2Z333 226 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 HYPMO75409 117 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 LINC00869P0C866 280 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 CXCL3P19876 107 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 SLC38A11Q08AI6 406 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 PSG3Q16557 428 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 TEPPQ6URK8 271 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 C20orf144Q9BQM9 153 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 C11orf1Q9H5F2 150 aa13.15□□□□□ -0.3
SCARF1-204ENST00000570902 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
SCARF1-204ENST00000570902 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 H3BNG1 76 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 GOSR2O14653 212 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 SIX6O95475 246 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 OR5G3P0C626 314 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 PVALBP20472 110 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-204ENST00000570902 SELENOTP62341 195 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 RAB32Q13637 225 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 ESRGQ1W209 222 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 LINC00612Q8N6U2 182 aa13.14□□□□□ -0.31
SCARF1-204ENST00000570902 A0A0J9YY99 117 aa13.13□□□□□ -0.31
SCARF1-204ENST00000570902 CST7O76096 145 aa13.13□□□□□ -0.31
SCARF1-204ENST00000570902 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
SCARF1-204ENST00000570902 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
SCARF1-204ENST00000570902 RLN2P04090 185 aa13.12□□□□□ -0.31
SCARF1-204ENST00000570902 PLP1P60201 277 aa13.12□□□□□ -0.31
SCARF1-204ENST00000570902 RPUSD4Q96CM3 377 aaKnown RBP13.12□□□□□ -0.31
SCARF1-204ENST00000570902 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
SCARF1-204ENST00000570902 ZNF586Q9NXT0 402 aa13.12□□□□□ -0.31
SCARF1-204ENST00000570902 AGPAT2O15120 278 aa13.11□□□□□ -0.31
SCARF1-204ENST00000570902 HOXA5P20719 270 aa13.11□□□□□ -0.31
SCARF1-204ENST00000570902 PGPEP1Q9NXJ5 209 aa13.11□□□□□ -0.31
SCARF1-204ENST00000570902 GAGE12BA1L429 117 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 SSNA1O43805 119 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 GAGE7O76087 117 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 CXCL2P19875 107 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 ZNF546Q86UE3 836 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 MGST2Q99735 147 aa13.1□□□□□ -0.31
SCARF1-204ENST00000570902 LYRM2Q9NU23 88 aaPredicted RBP13.1□□□□□ -0.31
SCARF1-204ENST00000570902 IGSF23A1L1A6 192 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 EREGO14944 169 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 SULT1A1P50225 295 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 LINC00315P59091 139 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 PATE2Q6UY27 113 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 TMEM252Q8N6L7 170 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 NMES1Q9C002 83 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 ARV1Q9H2C2 271 aa13.09□□□□□ -0.31
SCARF1-204ENST00000570902 H2BFSP57053 126 aa13.08□□□□□ -0.32
SCARF1-204ENST00000570902 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
SCARF1-204ENST00000570902 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
SCARF1-204ENST00000570902 STX12Q86Y82 276 aa13.08□□□□□ -0.32
SCARF1-204ENST00000570902 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
SCARF1-204ENST00000570902 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.32
SCARF1-204ENST00000570902 DMBT1Q9UGM3 2413 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-204ENST00000570902 PTTG1O95997 202 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 CAMLGP49069 296 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 CYCSP99999 105 aaKnown RBP13.07□□□□□ -0.32
SCARF1-204ENST00000570902 RAB31Q13636 194 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 ZNF331Q9NQX6 463 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-204ENST00000570902 OR5AC2Q9NZP5 309 aa13.07□□□□□ -0.32
SCARF1-204ENST00000570902 UBE2L5PA0A1B0GUS4 154 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 PRB4P10163 310 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-204ENST00000570902 S100A11P31949 105 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 HBG1P69891 147 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 HBG2P69892 147 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 PXDC1Q5TGL8 231 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 Q6ZRN7 208 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-204ENST00000570902 LINC00305Q7Z4B0 112 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 WDR83OSQ9Y284 106 aa13.06□□□□□ -0.32
SCARF1-204ENST00000570902 E5RGE8 158 aa13.05□□□□□ -0.32
SCARF1-204ENST00000570902 H0YIZ8 118 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms