RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 M0R3E3 92 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 SSNA1O43805 119 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 MPDU1O75352 247 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 NDUFB4O95168 129 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 MPC2O95563 127 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 RLN2P04090 185 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 CT45A10P0DMU9 189 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 CDKN1BP46527 198 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 DAD1P61803 113 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 ERCC8Q13216 396 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 FCN2Q15485 313 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 GUK1Q16774 197 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 GFI1BQ5VTD9 330 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 MIR17HGQ75NE6 70 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 OR10J6PQ8NGY7 276 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 PPP1R1CQ8WVI7 109 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 FAM167A-AS1Q96KT0 104 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 LINC01587Q99440 93 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 PFDN5Q99471 154 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 NDUFAF3Q9BU61 184 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 SLC25A2Q9BXI2 301 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 NPCDR1Q9BY65 106 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 WDR61Q9GZS3 305 aaKnown RBP3.83□□□□□ -1.8
CHD3-212ENST00000570758 BATF3Q9NR55 127 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 PPP1R14DQ9NXH3 145 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 HSPB11Q9Y547 144 aa3.83□□□□□ -1.8
CHD3-212ENST00000570758 TRBV19A0A075B6N1 114 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 LYRM9A8MSI8 78 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 NPIPB6E9PJ23 425 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 J3KRW8 73 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 ZNF253O75346 499 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 HIST1H1EP10412 219 aaKnown RBP3.82□□□□□ -1.8
CHD3-212ENST00000570758 HTN1P15515 57 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 TSPOP30536 169 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 TAS2R60P59551 318 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 DEFA1P59665 94 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 DEFA3P59666 94 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 CYCSP99999 105 aaKnown RBP3.82□□□□□ -1.8
CHD3-212ENST00000570758 OXA1LQ15070 435 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 TMEM88Q6PEY1 159 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 TMEM256Q8N2U0 113 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 EXOC3-AS1Q8N2X6 119 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 BLNKQ8WV28 456 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 MRPL53Q96EL3 112 aaKnown RBP3.82□□□□□ -1.8
CHD3-212ENST00000570758 ATP5SQ99766 215 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 SMIM3Q9BZL3 60 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 WFDC1Q9HC57 220 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 ALG5Q9Y673 324 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 FRAS1Q86XX4 4008 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
CHD3-212ENST00000570758 IGKV2-40A0A087WW87 121 aaPredicted RBP3.81□□□□□ -1.8
CHD3-212ENST00000570758 TRAV12-3A0A0B4J271 114 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 EIF3GO75821 320 aaKnown RBP eCLIP3.81□□□□□ -1.8
CHD3-212ENST00000570758 IGKV2D-40P01614 121 aaPredicted RBP3.81□□□□□ -1.8
CHD3-212ENST00000570758 P0DMU3 169 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 DEFB130BP0DP73 79 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 DEFB130AP0DP74 79 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 RPL12P30050 165 aaKnown RBP3.81□□□□□ -1.8
CHD3-212ENST00000570758 LEPP41159 167 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 ICAM4Q14773 271 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 FFAR4Q5NUL3 377 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 POM121L12Q8N7R1 296 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 RNASE8Q8TDE3 154 aaKnown RBP3.81□□□□□ -1.8
CHD3-212ENST00000570758 FXYD5Q96DB9 178 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 ZNF503Q96F45 646 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 C16orf74Q96GX8 76 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 FAM210BQ96KR6 192 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 C20orf144Q9BQM9 153 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 PAXXQ9BUH6 204 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 AGPAT4-IT1Q9H0P7 198 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 OR51M1Q9H341 326 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 NOP10Q9NPE3 64 aaKnown RBP3.81□□□□□ -1.8
CHD3-212ENST00000570758 MBD2Q9UBB5 411 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 FUT9Q9Y231 359 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 PRELID1Q9Y255 219 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 TIMM9Q9Y5J7 89 aa3.81□□□□□ -1.8
CHD3-212ENST00000570758 IGLV2-18A0A075B6J9 118 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 CBY3A6NI87 242 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 C17orf112F2Z3M2 114 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 F5H768 121 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 H7BYZ3 331 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 M0R2N4 97 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 OR10J4P0C629 311 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 NBEAP1P0C6P0 100 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 PET100P0DJ07 73 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 CD300CQ08708 224 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 BTN1A1Q13410 526 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 PDE6HQ13956 83 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 PRR9Q5T870 116 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 FAM122CQ6P4D5 195 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 Q6ZQT7 251 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 TMEM263Q8WUH6 116 aaKnown RBP3.8□□□□□ -1.8
CHD3-212ENST00000570758 RNF141Q8WVD5 230 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 PHYHIPLQ96FC7 376 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 FAM19A4Q96LR4 140 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms