RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
RAB40B-203ENST00000570676 TMPRSS5Q9H3S3 457 aa11.12□□□□□ -0.63
RAB40B-203ENST00000570676 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
RAB40B-203ENST00000570676 ZNF586Q9NXT0 402 aa11.12□□□□□ -0.63
RAB40B-203ENST00000570676 HYDINQ4G0P3 5121 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 A0A087X0K7 114 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 RGS13O14921 159 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 SPRY2O43597 315 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 NMBP08949 121 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
RAB40B-203ENST00000570676 GUK1Q16774 197 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 GBGT1Q8N5D6 347 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 NRN1Q9NPD7 142 aa11.11□□□□□ -0.63
RAB40B-203ENST00000570676 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 DNASE2O00115 360 aaPredicted RBP11.1□□□□□ -0.63
RAB40B-203ENST00000570676 PSMB3P49720 205 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 MEOX2P50222 304 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 PAFAH1B2P68402 229 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 CCL20P78556 96 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 RNF183Q96D59 192 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 MS4A6AQ9H2W1 248 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
RAB40B-203ENST00000570676 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
RAB40B-203ENST00000570676 FAM24BQ8N5W8 94 aa11.09□□□□□ -0.63
RAB40B-203ENST00000570676 LYPD6BQ8NI32 183 aa11.09□□□□□ -0.63
RAB40B-203ENST00000570676 SUN5Q8TC36 379 aa11.09□□□□□ -0.63
RAB40B-203ENST00000570676 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
RAB40B-203ENST00000570676 SLC17A3O00476 420 aa11.08□□□□□ -0.64
RAB40B-203ENST00000570676 NDUFB4O95168 129 aa11.08□□□□□ -0.64
RAB40B-203ENST00000570676 PPT1P50897 306 aa11.08□□□□□ -0.64
RAB40B-203ENST00000570676 PDE6HQ13956 83 aa11.08□□□□□ -0.64
RAB40B-203ENST00000570676 GNG13Q9P2W3 67 aa11.08□□□□□ -0.64
RAB40B-203ENST00000570676 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
RAB40B-203ENST00000570676 UBE2G2P60604 165 aa11.07□□□□□ -0.64
RAB40B-203ENST00000570676 RANP62826 216 aaKnown RBP11.07□□□□□ -0.64
RAB40B-203ENST00000570676 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
RAB40B-203ENST00000570676 DCANP1Q8TF63 244 aa11.07□□□□□ -0.64
RAB40B-203ENST00000570676 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
RAB40B-203ENST00000570676 SLC50A1Q9BRV3 221 aa11.07□□□□□ -0.64
RAB40B-203ENST00000570676 K7EQG2 157 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 SOCS3O14543 225 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 ZNF253O75346 499 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 IFNA1P01562 189 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 ID1P41134 155 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 PSG9Q00887 426 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 PMS2P11Q13670 270 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 IGFL4Q6B9Z1 124 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 MANBALQ9NQG1 85 aa11.06□□□□□ -0.64
RAB40B-203ENST00000570676 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
RAB40B-203ENST00000570676 YTHDF2Q9Y5A9 579 aaKnown RBP11.06□□□□□ -0.64
RAB40B-203ENST00000570676 PLECQ15149 4684 aaKnown RBP11.06□□□□□ -0.64
RAB40B-203ENST00000570676 TRAV8-2A0A0B4J237 113 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 ISLRO14498 428 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 PAGE4O60829 102 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 DEFB131AP59861 70 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 CST9LP1Q5W188 147 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 EXOC3-AS1Q8N2X6 119 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 Q9H3A6 140 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 AGRNO00468 2067 aa11.05□□□□□ -0.64
RAB40B-203ENST00000570676 EPPK1P58107 5090 aaKnown RBP11.04□□□□□ -0.64
RAB40B-203ENST00000570676 FAM74A7A6NL05 159 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 HLA-DMBP28068 263 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 SNRPD3P62318 126 aaKnown RBP11.04□□□□□ -0.64
RAB40B-203ENST00000570676 ICAM4Q14773 271 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 RNF182Q8N6D2 247 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 LINC00052Q96N35 136 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 OTORQ9NRC9 128 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 ARL2-SNX15V9GYD0 113 aa11.04□□□□□ -0.64
RAB40B-203ENST00000570676 PGPA6NDG6 321 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 CXorf65A6NEN9 183 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 NUPR2A6NF83 97 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 GGTLC3B5MD39 225 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 BCL2P10415 239 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
RAB40B-203ENST00000570676 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 CLEC5AQ9NY25 188 aa11.03□□□□□ -0.64
RAB40B-203ENST00000570676 LOC102723971A0A1B0GUV8 181 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 RBFOX3A6NFN3 312 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.65
RAB40B-203ENST00000570676 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.65
RAB40B-203ENST00000570676 TAGLN2P37802 199 aaKnown RBP11.02□□□□□ -0.65
RAB40B-203ENST00000570676 ATP5G3P48201 142 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 PSG3Q16557 428 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 PSMG4Q5JS54 123 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 LINC00476Q8WZB0 136 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 NKX6-2Q9C056 277 aaPredicted RBP11.02□□□□□ -0.65
RAB40B-203ENST00000570676 C11orf68Q9H3H3 251 aaKnown RBP11.02□□□□□ -0.65
RAB40B-203ENST00000570676 VAX2Q9UIW0 290 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 PRELID1Q9Y255 219 aa11.02□□□□□ -0.65
RAB40B-203ENST00000570676 C11orf94C9JXX5 98 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms