RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 RNASE11Q8TAA1 199 aaKnown RBP4.65□□□□□ -1.67
SMG6-205ENST00000570659 DTD1Q8TEA8 209 aa4.65□□□□□ -1.67
SMG6-205ENST00000570659 CHAC2Q8WUX2 184 aa4.65□□□□□ -1.67
SMG6-205ENST00000570659 LINC00477Q96M19 166 aa4.65□□□□□ -1.67
SMG6-205ENST00000570659 ZNF331Q9NQX6 463 aaPredicted RBP4.65□□□□□ -1.67
SMG6-205ENST00000570659 HSPB7Q9UBY9 170 aa4.65□□□□□ -1.67
SMG6-205ENST00000570659 PRO0255Q9UI72 69 aa4.65□□□□□ -1.67
SMG6-205ENST00000570659 TEX13DA0A0J9YY54 714 aaPredicted RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 NOL3O60936 208 aaKnown RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 ADAP1O75689 374 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 GPX4P36969 197 aaPredicted RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 TCL1AP56279 114 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 POLR2GP62487 172 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMG6-205ENST00000570659 MRPL23Q16540 153 aaKnown RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 C9orf47Q6ZRZ4 202 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 LYZL2Q7Z4W2 148 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 LRTM2Q8N967 370 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 OR4D5Q8NGN0 318 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 OR52I2Q8NH67 350 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 BLNKQ8WV28 456 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 RBPMSQ93062 196 aaKnown RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 S100A16Q96FQ6 103 aaKnown RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 SLC35E1Q96K37 410 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 FAM19A4Q96LR4 140 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 CNBD2Q96M20 576 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 MRPL32Q9BYC8 188 aaKnown RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 NAA60Q9H7X0 242 aa4.64□□□□□ -1.67
SMG6-205ENST00000570659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.64□□□□□ -1.67
SMG6-205ENST00000570659 TRAV9-2A0A087WT02 112 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 IGHV3-38A0A0C4DH36 116 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 M0R3E3 92 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 RS1O15537 224 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 RAB14P61106 215 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 LINC01556Q5JQF7 62 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 FAM122CQ6P4D5 195 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 CCDC28AQ8IWP9 274 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 ZNF486Q96H40 463 aaPredicted RBP4.63□□□□□ -1.67
SMG6-205ENST00000570659 VGLL1Q99990 258 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 C20orf144Q9BQM9 153 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 COPZ2Q9P299 210 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 SSR3Q9UNL2 185 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 TMEM56-RWDD3S4R434 201 aa4.63□□□□□ -1.67
SMG6-205ENST00000570659 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 CRYM-AS1A6NIL9 109 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 KLLNB2CW77 178 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 PITX3O75364 302 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 SULT1A3P0DMM9 295 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 SULT1A4P0DMN0 295 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 S100GP29377 79 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 SRIP30626 198 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 LSM3P62310 102 aaKnown RBP4.62□□□□□ -1.67
SMG6-205ENST00000570659 SAT2Q96F10 170 aaPredicted RBP4.62□□□□□ -1.67
SMG6-205ENST00000570659 PYGO2Q9BRQ0 406 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 TMEM147Q9BVK8 224 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 VCXQ9H320 206 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 EXTL2Q9UBQ6 330 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 Q9UF83 564 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 SLC45A2Q9UMX9 530 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 U3KQ87 197 aa4.62□□□□□ -1.67
SMG6-205ENST00000570659 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 C7orf71A4D174 169 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 A6NHS1 94 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 H3BP45 60 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 HPGDSO60760 199 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 RNASE4P34096 147 aaKnown RBP4.61□□□□□ -1.67
SMG6-205ENST00000570659 ANXA2RQ3ZCQ2 193 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 SCGB2B2Q4G0G5 96 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 SAMD13Q5VXD3 122 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 ACOT7LQ6ZUV0 252 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
SMG6-205ENST00000570659 ZFAND2AQ8N6M9 145 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 OR10P1Q8NGE3 313 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 TERB2Q8NHR7 220 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 AGPAT4-IT1Q9H0P7 198 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
SMG6-205ENST00000570659 HIGD1AQ9Y241 93 aa4.61□□□□□ -1.67
SMG6-205ENST00000570659 RNF222A6NCQ9 220 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 GABARAPH6UMI1 98 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 CIDEAO60543 219 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 GABARAPO95166 117 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 OR5G3P0C626 314 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 LINC00869P0C866 280 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 IGLC2P0DOY2 106 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 PCP4P48539 62 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 SMCO1Q147U7 214 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 RNASE10Q5GAN6 216 aaKnown RBP4.6□□□□□ -1.67
SMG6-205ENST00000570659 WDR73Q6P4I2 378 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 CYP2G1PQ6ZSU1 146 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 C10orf126Q8N4M7 172 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 EIF4E3Q8N5X7 224 aaKnown RBP4.6□□□□□ -1.67
SMG6-205ENST00000570659 BPIFCQ8NFQ6 507 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 GPR82Q96P67 336 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 BCL7BQ9BQE9 202 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 COMMD3Q9UBI1 195 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 GPR132Q9UNW8 380 aa4.6□□□□□ -1.67
SMG6-205ENST00000570659 TRGV4A0A0C4DH28 118 aa4.59□□□□□ -1.67
SMG6-205ENST00000570659 RBFOX3A6NFN3 312 aa4.59□□□□□ -1.67
SMG6-205ENST00000570659 HSBP1L1C9JCN9 74 aa4.59□□□□□ -1.67
SMG6-205ENST00000570659 K7EP13 123 aa4.59□□□□□ -1.67
SMG6-205ENST00000570659 ATG12O94817 140 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms