RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NDUFB4O95168 129 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 HIST1H1EP10412 219 aaKnown RBP9.32□□□□□ -0.92
CNOT1-220ENST00000569916 EMP1P54849 157 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 RRN3P1Q2M238 152 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 FAM167A-AS1Q96KT0 104 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 TMEM208Q9BTX3 173 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
CNOT1-220ENST00000569916 IGLL5B9A064 214 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 TCTAP57738 103 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 PDE6HQ13956 83 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 OR10J6PQ8NGY7 276 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 MRPL32Q9BYC8 188 aaKnown RBP9.31□□□□□ -0.92
CNOT1-220ENST00000569916 MED28Q9H204 178 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
CNOT1-220ENST00000569916 VPS13DQ5THJ4 4388 aa9.31□□□□□ -0.92
CNOT1-220ENST00000569916 DEFB131BA0A096LNP1 70 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 ZNF705GA8MUZ8 300 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-220ENST00000569916 NPIPB6E9PJ23 425 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 M0R3E3 92 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 IFNA5P01569 189 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 PRM2P04554 102 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 CDKN1BP46527 198 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 RPP25LQ8N5L8 163 aaKnown RBP9.3□□□□□ -0.92
CNOT1-220ENST00000569916 MRPL53Q96EL3 112 aaKnown RBP9.3□□□□□ -0.92
CNOT1-220ENST00000569916 PARD6GQ9BYG4 376 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-220ENST00000569916 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
CNOT1-220ENST00000569916 EPPK1P58107 5090 aaKnown RBP9.29□□□□□ -0.92
CNOT1-220ENST00000569916 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 FFAR4Q5NUL3 377 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 TMEM256Q8N2U0 113 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 BLNKQ8WV28 456 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 OR51M1Q9H341 326 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 FUT9Q9Y231 359 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 TIMM9Q9Y5J7 89 aa9.29□□□□□ -0.92
CNOT1-220ENST00000569916 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 OR10J4P0C629 311 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 TSPOP30536 169 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 SCGB1C1Q8TD33 95 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 ODF3Q96PU9 254 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
CNOT1-220ENST00000569916 GIPP09681 153 aaPredicted RBP9.27□□□□□ -0.93
CNOT1-220ENST00000569916 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 AZU1P20160 251 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 TAS2R60P59551 318 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 OXA1LQ15070 435 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 RGS21Q2M5E4 152 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 Q5BKY6 102 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 GFI1BQ5VTD9 330 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 PHYHIPLQ96FC7 376 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 AQP10Q96PS8 301 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 LINC01587Q99440 93 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 C20orf144Q9BQM9 153 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 AAMDCQ9H7C9 122 aa9.27□□□□□ -0.93
CNOT1-220ENST00000569916 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 OR7C2O60412 319 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 LEPP41159 167 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 ERCC8Q13216 396 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 ICAM4Q14773 271 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-220ENST00000569916 RNF141Q8WVD5 230 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 ASB13Q8WXK3 278 aa9.26□□□□□ -0.93
CNOT1-220ENST00000569916 DNAH6Q9C0G6 4158 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-220ENST00000569916 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 H7BYZ3 331 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 EIF3GO75821 320 aaKnown RBP eCLIP9.25□□□□□ -0.93
CNOT1-220ENST00000569916 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-220ENST00000569916 DAD1P61803 113 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 UBE2L3P68036 154 aaKnown RBP9.25□□□□□ -0.93
CNOT1-220ENST00000569916 KHDC3LQ587J8 217 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 FAM122CQ6P4D5 195 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 RNASE8Q8TDE3 154 aaKnown RBP9.25□□□□□ -0.93
CNOT1-220ENST00000569916 C16orf74Q96GX8 76 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 AGPAT4-IT1Q9H0P7 198 aa9.25□□□□□ -0.93
CNOT1-220ENST00000569916 J3KRW8 73 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 HTN1P15515 57 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 M6PRP20645 277 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 TAS2R45P59539 299 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 RAB2AP61019 212 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 ZNF266Q14584 549 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 ACOT6Q3I5F7 207 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-220ENST00000569916 C9orf47Q6ZRZ4 202 aa9.24□□□□□ -0.93
CNOT1-220ENST00000569916 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
CNOT1-220ENST00000569916 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms