RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RNF182Q8N6D2 247 aa17.4■□□□□ 0.38
RAB40C-212ENST00000569575 FBLL1A6NHQ2 334 aaKnown RBP17.39■□□□□ 0.37
RAB40C-212ENST00000569575 FAM74A7A6NL05 159 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 SLC25A5P05141 298 aaKnown RBP17.39■□□□□ 0.37
RAB40C-212ENST00000569575 HLA-DRB4P13762 266 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 EXOC3-AS1Q8N2X6 119 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 C20orf173Q96LM9 149 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 TUBA4BQ9H853 241 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 HLA-DRB4X5D2U9 266 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 NOTCH1P46531 2555 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 NBEAL1Q6ZS30 2694 aa17.39■□□□□ 0.37
RAB40C-212ENST00000569575 A0A0J9YX75 114 aa17.38■□□□□ 0.37
RAB40C-212ENST00000569575 F6UZH7 168 aa17.38■□□□□ 0.37
RAB40C-212ENST00000569575 SUMO1P63165 101 aaKnown RBP17.38■□□□□ 0.37
RAB40C-212ENST00000569575 STHQ8IWL8 128 aa17.38■□□□□ 0.37
RAB40C-212ENST00000569575 OR8A1Q8NGG7 326 aa17.38■□□□□ 0.37
RAB40C-212ENST00000569575 OR10J6PQ8NGY7 276 aa17.38■□□□□ 0.37
RAB40C-212ENST00000569575 K7EQM0 130 aa17.37■□□□□ 0.37
RAB40C-212ENST00000569575 NDUFS6O75380 124 aaKnown RBP17.37■□□□□ 0.37
RAB40C-212ENST00000569575 NUTF2P61970 127 aaKnown RBP17.37■□□□□ 0.37
RAB40C-212ENST00000569575 IGFL4Q6B9Z1 124 aa17.37■□□□□ 0.37
RAB40C-212ENST00000569575 APRG1Q8IVJ8 170 aa17.37■□□□□ 0.37
RAB40C-212ENST00000569575 DEFB125Q8N687 156 aa17.37■□□□□ 0.37
RAB40C-212ENST00000569575 HIST1H2BAQ96A08 127 aa17.37■□□□□ 0.37
RAB40C-212ENST00000569575 H3BMM0 161 aa17.36■□□□□ 0.37
RAB40C-212ENST00000569575 LINC00477Q96M19 166 aa17.36■□□□□ 0.37
RAB40C-212ENST00000569575 SRD5A3Q9H8P0 318 aa17.36■□□□□ 0.37
RAB40C-212ENST00000569575 DNHD1Q96M86 4753 aa17.36■□□□□ 0.37
RAB40C-212ENST00000569575 KIR2DL5BA0A0G2JN68 375 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 KIR2DL5BA0A0G2JPC4 375 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 A8MTW9 85 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 PAGE4O60829 102 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 NMBP08949 121 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 IGHV4-30-4P0DP06 118 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 CCL20P78556 96 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 ACTL10Q5JWF8 245 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 CST9LP1Q5W188 147 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 MORN3Q6PF18 240 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-212ENST00000569575 CCDC28AQ8IWP9 274 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 KIR2DL5AQ8N109 375 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 KIR2DL5BQ8NHK3 375 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 PPP1R14DQ9NXH3 145 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 GNG13Q9P2W3 67 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 EPDR1Q9UM22 224 aa17.35■□□□□ 0.37
RAB40C-212ENST00000569575 YTHDF2Q9Y5A9 579 aaKnown RBP17.35■□□□□ 0.37
RAB40C-212ENST00000569575 TRBV7-9A0A0J9YWB2 115 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 GGTLC3B5MD39 225 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 DIRC3C9JPN6 131 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 M0R3E3 92 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 HLA-DMBP28068 263 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 UBE2G2P60604 165 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 IFITM2Q01629 132 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 C9orf47Q6ZRZ4 202 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 TRPT1Q86TN4 253 aaKnown RBP17.34■□□□□ 0.37
RAB40C-212ENST00000569575 ODF3Q96PU9 254 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 ATG101Q9BSB4 218 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 VAX2Q9UIW0 290 aa17.34■□□□□ 0.37
RAB40C-212ENST00000569575 LOC102724200A0A096LPH7 203 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-212ENST00000569575 A0A1B0GV50 99 aa17.33■□□□□ 0.36
RAB40C-212ENST00000569575 BCL2P10415 239 aa17.33■□□□□ 0.36
RAB40C-212ENST00000569575 CLLU1Q5K131 121 aa17.33■□□□□ 0.36
RAB40C-212ENST00000569575 ZNF705FA8MVS1 300 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-212ENST00000569575 NPIPB6E9PJ23 425 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 K7EIL1 84 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 RGS13O14921 159 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 AMBPP02760 352 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 TCRAP04437 139 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 APOC4P55056 127 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 LINC00322Q6ZN03 302 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-212ENST00000569575 CITED4Q96RK1 184 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 LENEPQ9Y5L5 61 aa17.32■□□□□ 0.36
RAB40C-212ENST00000569575 C11orf94C9JXX5 98 aa17.31■□□□□ 0.36
RAB40C-212ENST00000569575 UBE2CO00762 179 aa17.31■□□□□ 0.36
RAB40C-212ENST00000569575 PDE6DO43924 150 aa17.31■□□□□ 0.36
RAB40C-212ENST00000569575 S100A9P06702 114 aaKnown RBP17.31■□□□□ 0.36
RAB40C-212ENST00000569575 CNN1P51911 297 aaKnown RBP17.31■□□□□ 0.36
RAB40C-212ENST00000569575 MEF2BQ02080 365 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-212ENST00000569575 HIST1H1AQ02539 215 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-212ENST00000569575 CYB561D1Q8N8Q1 229 aa17.31■□□□□ 0.36
RAB40C-212ENST00000569575 C1QTNF4Q9BXJ3 329 aa17.31■□□□□ 0.36
RAB40C-212ENST00000569575 SMDT1Q9H4I9 107 aa17.31■□□□□ 0.36
RAB40C-212ENST00000569575 KNCNA6PVL3 124 aa17.3■□□□□ 0.36
RAB40C-212ENST00000569575 TSPOP30536 169 aa17.3■□□□□ 0.36
RAB40C-212ENST00000569575 TMEM78Q5T7P6 136 aa17.3■□□□□ 0.36
RAB40C-212ENST00000569575 WFDC10AQ9H1F0 79 aa17.3■□□□□ 0.36
RAB40C-212ENST00000569575 RBFOX3A6NFN3 312 aa17.29■□□□□ 0.36
RAB40C-212ENST00000569575 OR4B1Q8NGF8 309 aa17.29■□□□□ 0.36
RAB40C-212ENST00000569575 FAM210AQ96ND0 272 aa17.29■□□□□ 0.36
RAB40C-212ENST00000569575 CMYA5Q8N3K9 4069 aa17.29■□□□□ 0.36
RAB40C-212ENST00000569575 PRAC2D3DTV9 90 aa17.28■□□□□ 0.36
RAB40C-212ENST00000569575 F6UB75 175 aa17.28■□□□□ 0.36
RAB40C-212ENST00000569575 ZNF124Q15973 351 aa17.28■□□□□ 0.36
RAB40C-212ENST00000569575 GDF5OSQ5U4N7 250 aa17.28■□□□□ 0.36
RAB40C-212ENST00000569575 TMEM75Q8N9X5 138 aa17.28■□□□□ 0.36
RAB40C-212ENST00000569575 CSTL1Q9H114 145 aa17.28■□□□□ 0.36
RAB40C-212ENST00000569575 LOC102723971A0A1B0GUV8 181 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 PEX7O00628 323 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 ZNF138P52744 262 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 DEFB121Q5J5C9 76 aa17.27■□□□□ 0.36
RAB40C-212ENST00000569575 ZNF506Q5JVG8 444 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms