RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 CLEC3BP05452 202 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 CFHR3Q02985 330 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 KIR3DS1Q14943 382 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 KLF17Q5JT82 389 aaPredicted RBP6.07□□□□□ -1.44
LINC00559-201ENST00000569476 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 DMDP11532 3685 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 SYS1-DBNDD2H3BUS1 97 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 RPLP1P05386 114 aaKnown RBP6.07□□□□□ -1.44
LINC00559-201ENST00000569476 FBLN7Q53RD9 439 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 LINC01545Q5VT33 79 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
LINC00559-201ENST00000569476 BEX4Q9NWD9 120 aaPredicted RBP6.07□□□□□ -1.44
LINC00559-201ENST00000569476 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 TRAV8-1A0A0A6YYK1 113 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 HSBP1L1C9JCN9 74 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 ARMS2P0C7Q2 107 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 PPIFP30405 207 aaKnown RBP6.07□□□□□ -1.44
LINC00559-201ENST00000569476 TMEM78Q5T7P6 136 aa6.07□□□□□ -1.44
LINC00559-201ENST00000569476 NXT2Q9NPJ8 142 aaKnown RBP6.07□□□□□ -1.44
LINC00559-201ENST00000569476 ARL3P36405 182 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 SMIM15Q7Z3B0 74 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 LINC01356Q8N9X3 169 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 C8orf49Q96NF6 230 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 AP5S1Q9NUS5 200 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 TNCP24821 2201 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 HLA-DRB4P13762 266 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 LGALS9BQ3B8N2 356 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 LGALS9CQ6DKI2 356 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 LYZL1Q6UWQ5 148 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 HLA-DRB4X5D2U9 266 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 PPP1R17O96001 155 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 IL17RELQ6ZVW7 336 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 PRELID3AQ96N28 172 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 SNHG12Q9BXW3 62 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 MYO15AQ9UKN7 3530 aa6.06□□□□□ -1.44
LINC00559-201ENST00000569476 TRAV8-2A0A0B4J237 113 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 IGHV4-61A0A0C4DH41 118 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 H3BTX0 84 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 TRGV3P03979 118 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 NTF3P20783 257 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 UQCRFS1P47985 274 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 PRB3Q04118 309 aaPredicted RBP6.05□□□□□ -1.44
LINC00559-201ENST00000569476 LOXL1Q08397 574 aaPredicted RBP6.05□□□□□ -1.44
LINC00559-201ENST00000569476 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 CLEC19AQ6UXS0 136 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 RNF152Q8N8N0 203 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 MRAP2Q96G30 205 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 FAM19A4Q96LR4 140 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 SOCS3O14543 225 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 NDUFS7O75251 213 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 CD24P25063 80 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 ZNF705AQ6ZN79 300 aaPredicted RBP6.05□□□□□ -1.44
LINC00559-201ENST00000569476 C8orf86Q6ZUL3 223 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 SMPXQ9UHP9 88 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 UFC1Q9Y3C8 167 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 IGKV2-40A0A087WW87 121 aaPredicted RBP6.05□□□□□ -1.44
LINC00559-201ENST00000569476 M0R3E3 92 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 IGKV2D-40P01614 121 aaPredicted RBP6.05□□□□□ -1.44
LINC00559-201ENST00000569476 HNRNPA3P51991 378 aaKnown RBP6.05□□□□□ -1.44
LINC00559-201ENST00000569476 ATP5J2P56134 94 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 GPHB5Q86YW7 130 aa6.05□□□□□ -1.44
LINC00559-201ENST00000569476 M0R381 172 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 DLEU1O43261 78 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 ID1P41134 155 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
LINC00559-201ENST00000569476 MAP1LC3AQ9H492 121 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 MUC3AQ02505 3323 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 FSHBP01225 129 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 HBDP02042 147 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 PRSS3P2Q8NHM4 247 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 PIEZO1Q92508 2521 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 SIVA1O15304 175 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 TCF21O43680 179 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 MRPL51Q4U2R6 128 aaKnown RBP6.04□□□□□ -1.44
LINC00559-201ENST00000569476 POM121L12Q8N7R1 296 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 VGLL1Q99990 258 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
LINC00559-201ENST00000569476 TRAV2A0A0B4J234 112 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 LGALS9O00182 355 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 G0S2P27469 103 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 OR10J6PQ8NGY7 276 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 SGK494Q96LW2 274 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 RNF114Q9Y508 228 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 WDFY3Q8IZQ1 3526 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 TRAV21A0A0B4J279 112 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 TRAV40A0A0B4J280 105 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 IGHV7-4-1A0A0J9YVY3 117 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 OR4C46A6NHA9 309 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 EREGO14944 169 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 FAM19A2Q8N3H0 131 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 VCANP13611 3396 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 NXPH4O95158 308 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 FAM106AQ4KMX7 169 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 Q8N8P6 123 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 TTC28Q96AY4 2481 aa6.03□□□□□ -1.44
LINC00559-201ENST00000569476 TMEM86BQ8N661 226 aa6.02□□□□□ -1.45
LINC00559-201ENST00000569476 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms