RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 FBXL19-AS1Q494R0 122 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 LCN12Q6JVE5 192 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 LY6G5BQ8NDX9 201 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 KCNS1Q96KK3 526 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 VAMP8Q9BV40 100 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 RPP21Q9H633 154 aaKnown RBP6.9□□□□□ -1.31
LINC00558-201ENST00000569422 IGHV3OR16-13A0A075B7E8 117 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 IGHV3-74A0A0B4J1X5 117 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 RIPPLY3P57055 190 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 ECSCRQ19T08 205 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 BPIFA4PQ86YQ2 179 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 GTSF1Q8WW33 167 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 UFC1Q9Y3C8 167 aa6.9□□□□□ -1.31
LINC00558-201ENST00000569422 RS1O15537 224 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 ZNF324O75467 553 aaPredicted RBP6.89□□□□□ -1.31
LINC00558-201ENST00000569422 CSN3P07498 182 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 PRTN3P24158 256 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 ZNF138P52744 262 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 FAM120AOSQ5T036 256 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 C1orf194Q5T5A4 169 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 ZNF491Q8N8L2 437 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 ORAOV1Q8WV07 137 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 ARPC1AQ92747 370 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 BORCS7Q96B45 105 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 PIEZO1Q92508 2521 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 TOMM40O96008 361 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 OR11H6Q8NGC7 330 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
LINC00558-201ENST00000569422 CSDC2Q9Y534 153 aaKnown RBP6.89□□□□□ -1.31
LINC00558-201ENST00000569422 A8MWL6 223 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 M0R2Z0 102 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 NDUFB8O95169 186 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 HLA-DRB1P01911 266 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 OR10J3Q5JRS4 329 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 FAM231DQ6ZW35 169 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 MRPL27Q9P0M9 148 aaKnown RBP6.88□□□□□ -1.31
LINC00558-201ENST00000569422 IGHV3-49A0A0A0MS15 119 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 CHEK1O14757 476 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 LTAP01374 205 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 TCTEX1D4Q5JR98 221 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 C11orf71Q6IPW1 123 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 Q86TA4 180 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 NEU4Q8WWR8 484 aaPredicted RBP6.88□□□□□ -1.31
LINC00558-201ENST00000569422 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 OTORQ9NRC9 128 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 PSG8Q9UQ74 426 aa6.88□□□□□ -1.31
LINC00558-201ENST00000569422 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 HBBP68871 147 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 CT83Q5H943 113 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 PVRIGQ6DKI7 326 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 SHANK2-AS3Q9BTD1 123 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 LINC00527Q9UJ94 153 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 ZNF785A8K8V0 405 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 LINC01559Q495D7 138 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 ZC2HC1AQ96GY0 325 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 C8orf49Q96NF6 230 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 C19orf84I3L1E1 186 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
LINC00558-201ENST00000569422 PLP1P60201 277 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 NIT1Q86X76 327 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 RNF5Q99942 180 aa6.87□□□□□ -1.31
LINC00558-201ENST00000569422 IGKV2-40A0A087WW87 121 aaPredicted RBP6.86□□□□□ -1.31
LINC00558-201ENST00000569422 M0R1W7 72 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 IGKV2D-40P01614 121 aaPredicted RBP6.86□□□□□ -1.31
LINC00558-201ENST00000569422 ESDP10768 282 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 GNLYP22749 145 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 HLA-DMBP28068 263 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 GPR183P32249 361 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 SPATA45Q537H7 98 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 ODF3BA8MYP8 253 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 H3BRN7 92 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 ZNF207O43670 478 aaKnown RBP6.86□□□□□ -1.31
LINC00558-201ENST00000569422 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 UNQ5815/PRO19632Q6UWF5 114 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 Q8TAT8 98 aa6.86□□□□□ -1.31
LINC00558-201ENST00000569422 KIR2DL5BA0A0G2JN68 375 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 KIR2DL5BA0A0G2JPC4 375 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 G3V318 75 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 NDUFA3O95167 84 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 KIR2DL5AQ8N109 375 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 NPBQ8NG41 125 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms