RNA–Protein interactions for RNA: ENST00000569390.1

NEIL1-222, Transcript of nei like DNA glycosylase 1, human

TSL 3

Gene NEIL1, Length 346 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-222	ENST00000569390	BATF3	Q9NR55	127 aa		13.32	□□□□□ -0.28
NEIL1-222	ENST00000569390	KCNIP2	Q9NS61	270 aa		13.32	□□□□□ -0.28
NEIL1-222	ENST00000569390	TMEM14C	Q9P0S9	112 aa		13.32	□□□□□ -0.28
NEIL1-222	ENST00000569390	SNRPC	P09234	159 aa	Known RBP	13.31	□□□□□ -0.28
NEIL1-222	ENST00000569390	OR5C1	Q8NGR4	320 aa		13.31	□□□□□ -0.28
NEIL1-222	ENST00000569390	TRAV5	A0A0B4J249	113 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390		H3BTX0	84 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	NHLH2	Q02577	135 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	PDE6H	Q13956	83 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	LRRC37A5P	Q49AS3	106 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	ZNF493	Q6ZR52	646 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	POM121L12	Q8N7R1	296 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	MRPL53	Q96EL3	112 aa	Known RBP	13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	ODF3	Q96PU9	254 aa		13.3	□□□□□ -0.28
NEIL1-222	ENST00000569390	DNAH10	Q8IVF4	4471 aa		13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390		H7BYZ3	331 aa		13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390	PET100	P0DJ07	73 aa		13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390	HIST1H1E	P10412	219 aa	Known RBP	13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390	C16orf74	Q96GX8	76 aa		13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390	ZNF586	Q9NXT0	402 aa		13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390	OR5AC2	Q9NZP5	309 aa		13.29	□□□□□ -0.28
NEIL1-222	ENST00000569390	DNAH6	Q9C0G6	4158 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	TRBV19	A0A075B6N1	114 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	SSNA1	O43805	119 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	HTN3	P15516	51 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	PPP1R1C	Q8WVI7	109 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	PLA2G2E	Q9NZK7	142 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	PRELID1	Q9Y255	219 aa		13.28	□□□□□ -0.28
NEIL1-222	ENST00000569390	PRAC2	D3DTV9	90 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	NPIPB6	E9PJ23	425 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390		H0YIZ8	118 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	LEP	P41159	167 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	H2BFS	P57053	126 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	CLINT1	Q14677	625 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	THAP6	Q8TBB0	222 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	TIMM9	Q9Y5J7	89 aa		13.27	□□□□□ -0.29
NEIL1-222	ENST00000569390	C17orf112	F2Z3M2	114 aa		13.26	□□□□□ -0.29
NEIL1-222	ENST00000569390	AZU1	P20160	251 aa		13.26	□□□□□ -0.29
NEIL1-222	ENST00000569390	C15orf53	Q8NAA6	179 aa		13.26	□□□□□ -0.29
NEIL1-222	ENST00000569390	TMEM263	Q8WUH6	116 aa	Known RBP	13.26	□□□□□ -0.29
NEIL1-222	ENST00000569390	WDR61	Q9GZS3	305 aa	Known RBP	13.26	□□□□□ -0.29
NEIL1-222	ENST00000569390	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.26	□□□□□ -0.29
NEIL1-222	ENST00000569390	PLAC8L1	A1L4L8	177 aa		13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	PRM2	P04554	102 aa		13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	HTN1	P15515	57 aa		13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	GFI1B	Q5VTD9	330 aa		13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	CCDC28A	Q8IWP9	274 aa		13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	MRPL32	Q9BYC8	188 aa	Known RBP	13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	AAMDC	Q9H7C9	122 aa		13.25	□□□□□ -0.29
NEIL1-222	ENST00000569390	FRAS1	Q86XX4	4008 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	MPC2	O95563	127 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	DEFB130B	P0DP73	79 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	DEFB130A	P0DP74	79 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	PRB4	P10163	310 aa	Predicted RBP	13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	RNF212	Q495C1	297 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	GCSAML	Q5JQS6	135 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	TMEM88	Q6PEY1	159 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	UBE2DNL	Q8IWF7	75 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	RNASE8	Q8TDE3	154 aa	Known RBP	13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	ATP5S	Q99766	215 aa		13.24	□□□□□ -0.29
NEIL1-222	ENST00000569390	CBY3	A6NI87	242 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	NDUFB4	O95168	129 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	ATP5G1	P05496	136 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	CT45A10	P0DMU9	189 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	PYY	P10082	97 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	ATP5G3	P48201	142 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	SLC25A2	Q9BXI2	301 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390	HSPB11	Q9Y547	144 aa		13.23	□□□□□ -0.29
NEIL1-222	ENST00000569390		M0R3E3	92 aa		13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	SLC25A5	P05141	298 aa	Known RBP	13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	BLNK	Q8WV28	456 aa		13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	FAM167A-AS1	Q96KT0	104 aa		13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	LINC00477	Q96M19	166 aa		13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	PYGO2	Q9BRQ0	406 aa		13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	OR51M1	Q9H341	326 aa		13.22	□□□□□ -0.29
NEIL1-222	ENST00000569390	IFNA5	P01569	189 aa		13.21	□□□□□ -0.29
NEIL1-222	ENST00000569390	NBEAP1	P0C6P0	100 aa		13.21	□□□□□ -0.29
NEIL1-222	ENST00000569390	KIR3DS1	Q14943	382 aa		13.21	□□□□□ -0.29
NEIL1-222	ENST00000569390	LINC00336	Q6ZUF6	198 aa		13.21	□□□□□ -0.29
NEIL1-222	ENST00000569390	MIR17HG	Q75NE6	70 aa		13.21	□□□□□ -0.29
NEIL1-222	ENST00000569390	FUT9	Q9Y231	359 aa		13.21	□□□□□ -0.29
NEIL1-222	ENST00000569390	RPL12	P30050	165 aa	Known RBP	13.2	□□□□□ -0.3
NEIL1-222	ENST00000569390	FAM3B	P58499	235 aa	Predicted RBP	13.2	□□□□□ -0.3
NEIL1-222	ENST00000569390	SCGB1C1	Q8TD33	95 aa		13.2	□□□□□ -0.3
NEIL1-222	ENST00000569390	PAXX	Q9BUH6	204 aa		13.2	□□□□□ -0.3
NEIL1-222	ENST00000569390	NOP10	Q9NPE3	64 aa	Known RBP	13.2	□□□□□ -0.3
NEIL1-222	ENST00000569390	TRAV12-3	A0A0B4J271	114 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	SNURFL	B1AK76	121 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390		F5H768	121 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	NMB	P08949	121 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	ICAM4	Q14773	271 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	FCN2	Q15485	313 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	LGALS9B	Q3B8N2	356 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	C9orf47	Q6ZRZ4	202 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	MBD2	Q9UBB5	411 aa		13.19	□□□□□ -0.3
NEIL1-222	ENST00000569390	C7orf71	A4D174	169 aa		13.18	□□□□□ -0.3
NEIL1-222	ENST00000569390		J3KRW8	73 aa		13.18	□□□□□ -0.3
NEIL1-222	ENST00000569390	TMEM78	Q5T7P6	136 aa		13.18	□□□□□ -0.3
NEIL1-222	ENST00000569390	EXOC3-AS1	Q8N2X6	119 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms