RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SSC4DQ8WTU2 575 aa5.71□□□□□ -1.49
CNOT1-216ENST00000569240 M0R1W7 72 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 APELAP0DMC3 54 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 SLC22A18ASQ8N1D0 253 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 F5P12259 2224 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 PCP2Q8IVA1 136 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 PLA2G2FQ9BZM2 168 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 A0A1W2PR77 199 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 M0QXV9 152 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 HTN1P15515 57 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 LEAP2Q969E1 77 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 SIGLEC9Q9Y336 463 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 DOCK4Q8N1I0 1966 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 A0A1B0GXF2 115 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 NUPR1O60356 82 aa5.71□□□□□ -1.5
CNOT1-216ENST00000569240 ZNF883P0CG24 379 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 C1orf122Q6ZSJ8 110 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 NRXN2Q9P2S2 1712 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 IGKV2-40A0A087WW87 121 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-216ENST00000569240 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 IGKV2D-40P01614 121 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-216ENST00000569240 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 MAFAQ8NHW3 353 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-216ENST00000569240 GOLGB1Q14789 3259 aaKnown RBP5.7□□□□□ -1.5
CNOT1-216ENST00000569240 GATA4P43694 442 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 STPG1Q5TH74 334 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 PRSS57Q6UWY2 283 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 FAM216BQ8N7L0 139 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 KNTC1P50748 2209 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 PARP14Q460N5 1801 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 WIPF3A6NGB9 483 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 UCNP55089 124 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 PSPNO60542 156 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 MORN5Q5VZ52 161 aa5.7□□□□□ -1.5
CNOT1-216ENST00000569240 HEATR5BQ9P2D3 2071 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 C10orf105Q8TEF2 133 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 CHD5Q8TDI0 1954 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 ZNF833PQ6ZTB9 187 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 PLXNA1Q9UIW2 1896 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 CRIPAKQ8N1N5 446 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 PLA2G2EQ9NZK7 142 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 CRYGCP07315 174 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 CFHR1Q03591 330 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 C14orf178Q8N769 122 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-216ENST00000569240 Q8TCH9 128 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 IGHV1-69P01742 117 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 IGHV3-48P01763 117 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 CCL3L1P16619 93 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 SS18Q15532 418 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 LINC01587Q99440 93 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 PRR19A6NJB7 356 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 CLEC19AQ6UXS0 136 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 C5orf24Q7Z6I8 188 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 SEC16AO15027 2179 aa5.69□□□□□ -1.5
CNOT1-216ENST00000569240 DAND5Q8N907 189 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 TRIP12Q14669 1992 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-216ENST00000569240 IGKV3-7A0A075B6H7 116 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 ODF1Q14990 250 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 IGHV1-8P0DP01 117 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 CCL4P13236 92 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 COX7CP15954 63 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 IGHV1-2P23083 117 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 F5H768 121 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 IGHG3P01860 377 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 HAMPP81172 84 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 NDUFA11Q86Y39 141 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 DCTN5Q9BTE1 182 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 IGHV1-3A0A0C4DH29 117 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 CLPSP04118 112 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 C17orf82Q86X59 251 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-216ENST00000569240 SIP14410 1827 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 SMIM9A6NGZ8 99 aa5.68□□□□□ -1.5
CNOT1-216ENST00000569240 FAM110DQ8TAY7 271 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-216ENST00000569240 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.68□□□□□ -1.5
CNOT1-216ENST00000569240 SMKR1H3BMG3 65 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 MP68P56378 58 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 RNF138Q8WVD3 245 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 ZC2HC1AQ96GY0 325 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 TRAV3A0A0B4J244 114 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 FAM90A27PA6NNH2 459 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 TEX36Q5VZQ5 186 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 UFSP1Q6NVU6 142 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 RNF152Q8N8N0 203 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 TDRD15B5MCY1 1934 aaKnown RBP5.67□□□□□ -1.5
CNOT1-216ENST00000569240 PPIFP30405 207 aaKnown RBP5.67□□□□□ -1.5
CNOT1-216ENST00000569240 Q8N1Y9 231 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 FGFBP3Q8TAT2 258 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 TOMM6Q96B49 74 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 A4D1N5 150 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 ZNF837Q96EG3 531 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-216ENST00000569240 MCRIP2Q9BUT9 160 aaKnown RBP5.67□□□□□ -1.5
CNOT1-216ENST00000569240 OTOFQ9HC10 1997 aa5.67□□□□□ -1.5
CNOT1-216ENST00000569240 TRBV30A0A0K0K1B3 111 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms