RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 PFDN1O60925 122 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 JTBO76095 146 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 NDUFB4O95168 129 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 MBP02144 154 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 PMS2P11Q13670 270 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 PDE6HQ13956 83 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 AKR1C8PQ5T2L2 129 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 IQCF2Q8IXL9 164 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 FXYD5Q96DB9 178 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 PRELID1Q9Y255 219 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 GOLT1BQ9Y3E0 138 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 TRAV12-2A0A075B6T6 113 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 IGHV4-28A0A0C4DH34 117 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 CXorf65A6NEN9 183 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 C3orf84H3BNL1 204 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 J3KRW8 73 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 INSP01308 110 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 RANP62826 216 aaKnown RBP9.31□□□□□ -0.92
CDT1-203ENST00000569140 SERF2P84101 59 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 ZNF345Q14585 488 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 KCNRGQ8N5I3 272 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 ACTR3CQ9C0K3 210 aaPredicted RBP9.31□□□□□ -0.92
CDT1-203ENST00000569140 RPH3ALQ9UNE2 315 aa9.31□□□□□ -0.92
CDT1-203ENST00000569140 A0A0D9SG52 128 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 HMSDA8MTL9 139 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 AMBPP02760 352 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 ARL14EPLP0DKL9 152 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 MIFP14174 115 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 CSN1S1P47710 185 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 PQLC2Q6ZP29 291 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 AKAP14Q86UN6 197 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 MRPL53Q96EL3 112 aaKnown RBP9.3□□□□□ -0.92
CDT1-203ENST00000569140 ZNF503Q96F45 646 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 ST6GAL2Q96JF0 529 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 HYLS1Q96M11 299 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 ZNF471Q9BX82 626 aaPredicted RBP9.3□□□□□ -0.92
CDT1-203ENST00000569140 Q9H3A6 140 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 X6R8D5 127 aa9.3□□□□□ -0.92
CDT1-203ENST00000569140 IGKV2-40A0A087WW87 121 aaPredicted RBP9.29□□□□□ -0.92
CDT1-203ENST00000569140 ZNF705EA8MWA4 302 aaPredicted RBP9.29□□□□□ -0.92
CDT1-203ENST00000569140 BCL2L11O43521 198 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
CDT1-203ENST00000569140 EMP1P54849 157 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 ERCC8Q13216 396 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 RPP25LQ8N5L8 163 aaKnown RBP9.29□□□□□ -0.92
CDT1-203ENST00000569140 Q8NAQ8 132 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 RAB24Q969Q5 203 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 C11orf68Q9H3H3 251 aaKnown RBP9.29□□□□□ -0.92
CDT1-203ENST00000569140 CYTL1Q9NRR1 136 aa9.29□□□□□ -0.92
CDT1-203ENST00000569140 NBEAL2Q6ZNJ1 2754 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 A8MTW9 85 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 HBE1P02100 147 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 TSPOP30536 169 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 LEPP41159 167 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 CDKN1BP46527 198 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 CASC10Q5T4H9 136 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 TMUB2Q71RG4 321 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 TCTE3Q8IZS6 198 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
CDT1-203ENST00000569140 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 CXorf1O96002 111 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 STAG3L2P0CL84 134 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 STAG3L3P0CL85 134 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
CDT1-203ENST00000569140 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 HTN1P15515 57 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 GCHFRP30047 84 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 NANOS2P60321 138 aaKnown RBP9.27□□□□□ -0.93
CDT1-203ENST00000569140 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
CDT1-203ENST00000569140 TMEM78Q5T7P6 136 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 ZNF705AQ6ZN79 300 aaPredicted RBP9.27□□□□□ -0.93
CDT1-203ENST00000569140 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 LINC01587Q99440 93 aa9.27□□□□□ -0.93
CDT1-203ENST00000569140 PGPA6NDG6 321 aa9.26□□□□□ -0.93
CDT1-203ENST00000569140 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
CDT1-203ENST00000569140 FGF8P55075 233 aaPredicted RBP9.26□□□□□ -0.93
CDT1-203ENST00000569140 EIF5AP63241 154 aaKnown RBP9.26□□□□□ -0.93
CDT1-203ENST00000569140 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
CDT1-203ENST00000569140 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
CDT1-203ENST00000569140 LYPD1Q8N2G4 141 aa9.26□□□□□ -0.93
CDT1-203ENST00000569140 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
CDT1-203ENST00000569140 CTXND1A0A1B0GTU2 59 aa9.25□□□□□ -0.93
CDT1-203ENST00000569140 LOC102723971A0A1B0GUV8 181 aa9.25□□□□□ -0.93
CDT1-203ENST00000569140 SMIM9A6NGZ8 99 aa9.25□□□□□ -0.93
CDT1-203ENST00000569140 ZNF705GA8MUZ8 300 aaPredicted RBP9.25□□□□□ -0.93
CDT1-203ENST00000569140 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
CDT1-203ENST00000569140 C1QBP02746 253 aa9.25□□□□□ -0.93
CDT1-203ENST00000569140 SLC25A5P05141 298 aaKnown RBP9.25□□□□□ -0.93
CDT1-203ENST00000569140 TPT1P13693 172 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms