RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 HMGB3O15347 200 aaKnown RBP9.36□□□□□ -0.91
TSC2-220ENST00000568238 OR10J4P0C629 311 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 CDC34P49427 236 aaPredicted RBP9.36□□□□□ -0.91
TSC2-220ENST00000568238 DEFB1P60022 68 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 KHDC3LQ587J8 217 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 AKR1C8PQ5T2L2 129 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 LCN15Q6UWW0 184 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 RPP25LQ8N5L8 163 aaKnown RBP9.36□□□□□ -0.91
TSC2-220ENST00000568238 BLNKQ8WV28 456 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 HRH4Q9H3N8 390 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 ZNF586Q9NXT0 402 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
TSC2-220ENST00000568238 HIST1H1EP10412 219 aaKnown RBP9.35□□□□□ -0.91
TSC2-220ENST00000568238 TPT1P13693 172 aaKnown RBP9.35□□□□□ -0.91
TSC2-220ENST00000568238 MIFP14174 115 aa9.35□□□□□ -0.91
TSC2-220ENST00000568238 TAS2R45P59539 299 aa9.35□□□□□ -0.91
TSC2-220ENST00000568238 EIF5AP63241 154 aaKnown RBP9.35□□□□□ -0.91
TSC2-220ENST00000568238 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
TSC2-220ENST00000568238 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
TSC2-220ENST00000568238 ZNF738Q8NE65 137 aa9.35□□□□□ -0.91
TSC2-220ENST00000568238 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
TSC2-220ENST00000568238 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
TSC2-220ENST00000568238 TRBV19A0A075B6N1 114 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 IGHV4-28A0A0C4DH34 117 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 ZNF705EA8MWA4 302 aaPredicted RBP9.34□□□□□ -0.91
TSC2-220ENST00000568238 F6UB75 175 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 GUK1Q16774 197 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 STOML3Q8TAV4 291 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 RNF141Q8WVD5 230 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 TMED6Q8WW62 240 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 ZNF503Q96F45 646 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 ACTR3CQ9C0K3 210 aaPredicted RBP9.34□□□□□ -0.91
TSC2-220ENST00000568238 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
TSC2-220ENST00000568238 CLEC5AQ9NY25 188 aa9.34□□□□□ -0.91
TSC2-220ENST00000568238 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
TSC2-220ENST00000568238 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 ARL14EPLP0DKL9 152 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
TSC2-220ENST00000568238 ZNF726P1Q15940 193 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 GDF5OSQ5U4N7 250 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 SAT2Q96F10 170 aaPredicted RBP9.33□□□□□ -0.92
TSC2-220ENST00000568238 C1QTNF4Q9BXJ3 329 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 X6R8D5 127 aa9.33□□□□□ -0.92
TSC2-220ENST00000568238 C11orf94C9JXX5 98 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 H3BMM0 161 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 NDUFB4O95168 129 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 NBEAP1P0C6P0 100 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 HLA-DRB4P13762 266 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
TSC2-220ENST00000568238 PSG3Q16557 428 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 PQLC2Q6ZP29 291 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 FOXI2Q6ZQN5 318 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 SLC51BQ86UW2 128 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 IQCF2Q8IXL9 164 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 FAM213BQ8TBF2 198 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 PLA2G2EQ9NZK7 142 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 HLA-DRB4X5D2U9 266 aa9.32□□□□□ -0.92
TSC2-220ENST00000568238 CTXND1A0A1B0GTU2 59 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 ZNF705FA8MVS1 300 aaPredicted RBP9.31□□□□□ -0.92
TSC2-220ENST00000568238 BOLA2-SMG1P6H3BVE0 249 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 ZNF253O75346 499 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 STAG3L2P0CL84 134 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 STAG3L3P0CL85 134 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 FHITP49789 147 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 TCTAP57738 103 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 PSG9Q00887 426 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 PDE6HQ13956 83 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 RPUSD4Q96CM3 377 aaKnown RBP9.31□□□□□ -0.92
TSC2-220ENST00000568238 SAV1Q9H4B6 383 aaPredicted RBP9.31□□□□□ -0.92
TSC2-220ENST00000568238 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
TSC2-220ENST00000568238 A0A0J9YX75 114 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 MAP1LC3B2A6NCE7 125 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 UMAD1C9J7I0 102 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 CXorf1O96002 111 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 ZNF705DP0CH99 300 aaPredicted RBP9.3□□□□□ -0.92
TSC2-220ENST00000568238 ZNF705BP0CI00 300 aaPredicted RBP9.3□□□□□ -0.92
TSC2-220ENST00000568238 GCHFRP30047 84 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 FGF8P55075 233 aaPredicted RBP9.3□□□□□ -0.92
TSC2-220ENST00000568238 RANP62826 216 aaKnown RBP9.3□□□□□ -0.92
TSC2-220ENST00000568238 HIST1H1AQ02539 215 aaPredicted RBP9.3□□□□□ -0.92
TSC2-220ENST00000568238 EIF5AL1Q6IS14 154 aaKnown RBP9.3□□□□□ -0.92
TSC2-220ENST00000568238 Q6ZTC4 211 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 MAP1LC3BQ9GZQ8 125 aa9.3□□□□□ -0.92
TSC2-220ENST00000568238 IGLL5B9A064 214 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms