RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	ODF3	Q96PU9	254 aa		7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	SOST	Q9BQB4	213 aa		7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	RSL24D1	Q9UHA3	163 aa	Known RBP	7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	TRGV2	A0A075B6R0	118 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	LINC00854	A0A1B0GVQ3	168 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	FNDC10	F2Z333	226 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	FAM229A	H3BQW9	127 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169		J3KRW8	73 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	SLC17A3	O00476	420 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	ZNF324	O75467	553 aa	Predicted RBP	7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	SFT2D2	O95562	160 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	HOXB5	P09067	269 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	SNRPC	P09234	159 aa	Known RBP	7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	SMIM18	P0DKX4	95 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	LEP	P41159	167 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	C11orf72	Q8NBR9	251 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	NPVF	Q9HCQ7	196 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	GSN-AS1	Q9NRJ2	163 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	PSENEN	Q9NZ42	101 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	FUT9	Q9Y231	359 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	ICOS	Q9Y6W8	199 aa		7.73	□□□□□ -1.17
TCF4-238	ENST00000568169	SRRM2	Q9UQ35	2752 aa	Known RBP	7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	NPIPB6	E9PJ23	425 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	PAX4	O43316	350 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	CCNK	O75909	580 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	GCSH	P23434	173 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	POLR2G	P62487	172 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	PPP1R1A	Q13522	171 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	TEPP	Q6URK8	271 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	LYPD5	Q6UWN5	251 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	LINC00305	Q7Z4B0	112 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	BPIFA4P	Q86YQ2	179 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	ZNF680	Q8NEM1	530 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	SAT2	Q96F10	170 aa	Predicted RBP	7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	SMIM8	Q96KF7	97 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	PXMP4	Q9Y6I8	212 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	FAT1	Q14517	4588 aa		7.72	□□□□□ -1.17
TCF4-238	ENST00000568169	TRAV9-2	A0A087WT02	112 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	TRGV1	A0A0A0MS02	117 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169		H3BQ15	152 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169		H3BTX0	84 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	SLC25A5	P05141	298 aa	Known RBP	7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	IGLC2	P0DOY2	106 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	FAU	P35544	74 aa	Known RBP	7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	RRAS2	P62070	204 aa	Predicted RBP	7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	SLC38A11	Q08AI6	406 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	MORN5	Q5VZ52	161 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	TMEM14EP	Q6UXP3	125 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169		Q6ZSN1	163 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	DYNC2LI1	Q8TCX1	351 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	SLC25A21	Q9BQT8	299 aa	Predicted RBP	7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	LINC00467	Q9BRT7	94 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	MSRB1	Q9NZV6	116 aa		7.71	□□□□□ -1.18
TCF4-238	ENST00000568169	C7orf71	A4D174	169 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169		K7EP13	123 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	GOSR2	O14653	212 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	SPINK4	O60575	86 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	METTL15P1	P0C7V9	234 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	TNFSF8	P32971	234 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	TCL1A	P56279	114 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	OPCML	Q14982	345 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	MRPL23	Q16540	153 aa	Known RBP	7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	ANXA2R	Q3ZCQ2	193 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	ZNF546	Q86UE3	836 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	TMEM37	Q8WXS4	190 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	TRIM63	Q969Q1	353 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	ST6GAL2	Q96JF0	529 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	TMEM70	Q9BUB7	260 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	CCDC59	Q9P031	241 aa	Known RBP	7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	PRO0255	Q9UI72	69 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	KLF12	Q9Y4X4	402 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	LY96	Q9Y6Y9	160 aa		7.7	□□□□□ -1.18
TCF4-238	ENST00000568169	FABP12	A6NFH5	140 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	KLLN	B2CW77	178 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	AGPAT2	O15120	278 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	SSSCA1	O60232	199 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	CRYBA4	P53673	196 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	HAMP	P81172	84 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	SLA	Q13239	276 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	EIF4E3	Q8N5X7	224 aa	Known RBP	7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	OR10P1	Q8NGE3	313 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	MGAT4C	Q9UBM8	478 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	MYCBP2	O75592	4640 aa		7.69	□□□□□ -1.18
TCF4-238	ENST00000568169	COX7A2P2	O60397	106 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	PRAF2	O60831	178 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	IGHV3-53	P01767	116 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	AP3S2	P59780	193 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	CD300C	Q08708	224 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	ARL16	Q0P5N6	197 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	FHL2	Q14192	279 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	GUK1	Q16774	197 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	IBA57	Q5T440	356 aa	Known RBP	7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	C10orf113	Q5VZT2	155 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	NEGR1	Q7Z3B1	354 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	MCFD2	Q8NI22	146 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	FAM19A4	Q96LR4	140 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	VGLL1	Q99990	258 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	HHLA3	Q9XRX5	114 aa		7.68	□□□□□ -1.18
TCF4-238	ENST00000568169	C9orf170	A2RU37	121 aa		7.67	□□□□□ -1.18
TCF4-238	ENST00000568169	ZNF253	O75346	499 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms