RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
CNOT1-213ENST00000568158 RBMY1FQ15415 496 aaKnown RBP9.42□□□□□ -0.9
CNOT1-213ENST00000568158 SPINK13Q1W4C9 94 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 EXOC3-AS1Q8N2X6 119 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 OR10G4Q8NGN3 311 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 OR10G9Q8NGN4 311 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 OR10G7Q8NGN6 311 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 IL17DQ8TAD2 202 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 SH3BGRL3Q9H299 93 aa9.42□□□□□ -0.9
CNOT1-213ENST00000568158 A0A1W2PPV4 95 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
CNOT1-213ENST00000568158 OR7C2O60412 319 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 ZNF253O75346 499 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-213ENST00000568158 ICAM4Q14773 271 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 Q8NAQ8 132 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
CNOT1-213ENST00000568158 TRAV12-2A0A075B6T6 113 aa9.4□□□□□ -0.9
CNOT1-213ENST00000568158 BORCS7-ASMTA0A0B4J1R7 106 aa9.4□□□□□ -0.9
CNOT1-213ENST00000568158 IGHV4-28A0A0C4DH34 117 aa9.4□□□□□ -0.9
CNOT1-213ENST00000568158 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-213ENST00000568158 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-213ENST00000568158 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
CNOT1-213ENST00000568158 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
CNOT1-213ENST00000568158 ST6GAL2Q96JF0 529 aa9.4□□□□□ -0.9
CNOT1-213ENST00000568158 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-213ENST00000568158 PRM2P04554 102 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 MIFP14174 115 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 TAS2R45P59539 299 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
CNOT1-213ENST00000568158 SERF2P84101 59 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 ERCC8Q13216 396 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 PDE6HQ13956 83 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 OR10J6PQ8NGY7 276 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 PHYHIPLQ96FC7 376 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
CNOT1-213ENST00000568158 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 BOLA2-SMG1P6H3BVE0 249 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 TAAR5O14804 337 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 CT45A10P0DMU9 189 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
CNOT1-213ENST00000568158 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 KIR3DS1Q14943 382 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 KHDC3LQ587J8 217 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 GNPNAT1Q96EK6 184 aaPredicted RBP9.38□□□□□ -0.91
CNOT1-213ENST00000568158 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
CNOT1-213ENST00000568158 AAMDCQ9H7C9 122 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
CNOT1-213ENST00000568158 JTBO76095 146 aa9.37□□□□□ -0.91
CNOT1-213ENST00000568158 AMBPP02760 352 aa9.37□□□□□ -0.91
CNOT1-213ENST00000568158 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
CNOT1-213ENST00000568158 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
CNOT1-213ENST00000568158 C11orf45Q8TAV5 145 aa9.37□□□□□ -0.91
CNOT1-213ENST00000568158 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
CNOT1-213ENST00000568158 NEU1Q99519 415 aa9.37□□□□□ -0.91
CNOT1-213ENST00000568158 AGPAT4-IT1Q9H0P7 198 aa9.37□□□□□ -0.91
CNOT1-213ENST00000568158 Q9H3A6 140 aa9.37□□□□□ -0.91
CNOT1-213ENST00000568158 PGPA6NDG6 321 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 CXorf65A6NEN9 183 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 ZNF705GA8MUZ8 300 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-213ENST00000568158 NPIPB6E9PJ23 425 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 J3KRW8 73 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 MBP02144 154 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 PQLC2Q6ZP29 291 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 SSX7Q7RTT5 188 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 ARPC5LQ9BPX5 153 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 TMEM208Q9BTX3 173 aa9.36□□□□□ -0.91
CNOT1-213ENST00000568158 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-213ENST00000568158 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
CNOT1-213ENST00000568158 A0A0D9SG52 128 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 SMIM9A6NGZ8 99 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 INSP01308 110 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
CNOT1-213ENST00000568158 ARL14EPLP0DKL9 152 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 CDKN1BP46527 198 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 EMP1P54849 157 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 ZNF726P1Q15940 193 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 LINC00477Q96M19 166 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 LINC01587Q99440 93 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 VGLL1Q99990 258 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 CELA1Q9UNI1 258 aa9.35□□□□□ -0.91
CNOT1-213ENST00000568158 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
CNOT1-213ENST00000568158 HBE1P02100 147 aa9.34□□□□□ -0.91
CNOT1-213ENST00000568158 AZU1P20160 251 aa9.34□□□□□ -0.91
CNOT1-213ENST00000568158 GCHFRP30047 84 aa9.34□□□□□ -0.91
CNOT1-213ENST00000568158 ZNF345Q14585 488 aa9.34□□□□□ -0.91
CNOT1-213ENST00000568158 RRN3P1Q2M238 152 aa9.34□□□□□ -0.91
CNOT1-213ENST00000568158 TMUB2Q71RG4 321 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms