RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
COMMD4-220ENST00000567720 XCL2Q9UBD3 114 aa12.53□□□□□ -0.4
COMMD4-220ENST00000567720 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
COMMD4-220ENST00000567720 BCL2L11O43521 198 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 NBEAP1P0C6P0 100 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 NUTF2P61970 127 aaKnown RBP12.52□□□□□ -0.41
COMMD4-220ENST00000567720 PSG9Q00887 426 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 CD300CQ08708 224 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 SSX7Q7RTT5 188 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 AKAP14Q86UN6 197 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
COMMD4-220ENST00000567720 A0A0D9SG52 128 aa12.51□□□□□ -0.41
COMMD4-220ENST00000567720 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
COMMD4-220ENST00000567720 DUSP14O95147 198 aaKnown RBP12.51□□□□□ -0.41
COMMD4-220ENST00000567720 OR11H2Q8NH07 326 aa12.51□□□□□ -0.41
COMMD4-220ENST00000567720 MRPL53Q96EL3 112 aaKnown RBP12.51□□□□□ -0.41
COMMD4-220ENST00000567720 C1QTNF4Q9BXJ3 329 aa12.51□□□□□ -0.41
COMMD4-220ENST00000567720 A0A0J9YWU9 116 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 ZNF705EA8MWA4 302 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-220ENST00000567720 MBP02144 154 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 C1QBP02746 253 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 STAG3L2P0CL84 134 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 STAG3L3P0CL85 134 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 ARL14EPLP0DKL9 152 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 PQLC2Q6ZP29 291 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 RAB24Q969Q5 203 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 RARRES2Q99969 163 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 X6R8D5 127 aa12.5□□□□□ -0.41
COMMD4-220ENST00000567720 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 M0R2Z0 102 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 ICAM4Q14773 271 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 ZNF726P1Q15940 193 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 SPINK13Q1W4C9 94 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 TMUB2Q71RG4 321 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-220ENST00000567720 AAMDCQ9H7C9 122 aa12.49□□□□□ -0.41
COMMD4-220ENST00000567720 Q8NAQ8 132 aa12.48□□□□□ -0.41
COMMD4-220ENST00000567720 PRELID1Q9Y255 219 aa12.48□□□□□ -0.41
COMMD4-220ENST00000567720 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
COMMD4-220ENST00000567720 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
COMMD4-220ENST00000567720 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-220ENST00000567720 PFDN1O60925 122 aa12.47□□□□□ -0.41
COMMD4-220ENST00000567720 ZNF705AQ6ZN79 300 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-220ENST00000567720 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
COMMD4-220ENST00000567720 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
COMMD4-220ENST00000567720 MUC7Q8TAX7 377 aa12.47□□□□□ -0.41
COMMD4-220ENST00000567720 Q9H3A6 140 aa12.47□□□□□ -0.41
COMMD4-220ENST00000567720 C11orf68Q9H3H3 251 aaKnown RBP12.47□□□□□ -0.41
COMMD4-220ENST00000567720 IGKV2-40A0A087WW87 121 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-220ENST00000567720 IGKV2D-40P01614 121 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-220ENST00000567720 RANP62826 216 aaKnown RBP12.46□□□□□ -0.41
COMMD4-220ENST00000567720 LGALSLQ3ZCW2 172 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-220ENST00000567720 AKR1C8PQ5T2L2 129 aa12.46□□□□□ -0.41
COMMD4-220ENST00000567720 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-220ENST00000567720 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 IGHV4-28A0A0C4DH34 117 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 DEFB4AO15263 64 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 RBMY1A1P0DJD3 496 aaKnown RBP12.45□□□□□ -0.42
COMMD4-220ENST00000567720 RBMY1CP0DJD4 496 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 GCHFRP30047 84 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
COMMD4-220ENST00000567720 C1orf158Q8N1D5 194 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
COMMD4-220ENST00000567720 TENM2Q9NT68 2774 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 INSP01308 110 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 AMBPP02760 352 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 MIFP14174 115 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 ERCC8Q13216 396 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 KIR3DS1Q14943 382 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 STOML3Q8TAV4 291 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 SUN5Q8TC36 379 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 HYLS1Q96M11 299 aa12.44□□□□□ -0.42
COMMD4-220ENST00000567720 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
COMMD4-220ENST00000567720 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 CXorf1O96002 111 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 SEC11BP0C7V7 166 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 CT45A10P0DMU9 189 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 CDKN1BP46527 198 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 FHITP49789 147 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 C9orf62Q8N4C0 152 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 ODF3Q96PU9 254 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 OTORQ9NRC9 128 aa12.43□□□□□ -0.42
COMMD4-220ENST00000567720 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
COMMD4-220ENST00000567720 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
COMMD4-220ENST00000567720 FGF8P55075 233 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-220ENST00000567720 IL17DQ8TAD2 202 aa12.42□□□□□ -0.42
COMMD4-220ENST00000567720 TMED6Q8WW62 240 aa12.42□□□□□ -0.42
COMMD4-220ENST00000567720 NEU1Q99519 415 aa12.42□□□□□ -0.42
COMMD4-220ENST00000567720 VGLL1Q99990 258 aa12.42□□□□□ -0.42
COMMD4-220ENST00000567720 PPP1R14DQ9NXH3 145 aa12.42□□□□□ -0.42
COMMD4-220ENST00000567720 GOLT1BQ9Y3E0 138 aa12.42□□□□□ -0.42
COMMD4-220ENST00000567720 MAP1LC3B2A6NCE7 125 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 EIF5AP63241 154 aaKnown RBP12.41□□□□□ -0.42
COMMD4-220ENST00000567720 ZFP69Q49AA0 526 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms