RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 ZNF331Q9NQX6 463 aaPredicted RBP8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 CLEC5AQ9NY25 188 aa8.31□□□□□ -1.08
VPS9D1-206ENST00000567379 TRBV24-1A0A075B6N3 115 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 TGIF2-C20orf24A0A0A6YYL0 155 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 M0R3E3 92 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 LTAP01374 205 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 CDX1P47902 265 aaPredicted RBP8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 FLI1Q01543 452 aaPredicted RBP8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 PSG3Q16557 428 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 TM4SF20Q53R12 229 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 REC114Q7Z4M0 266 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 PRNTQ86SH4 94 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 Q86TA4 180 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 NHLRC2Q8NBF2 726 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 SMPXQ9UHP9 88 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 PSG8Q9UQ74 426 aa8.3□□□□□ -1.08
VPS9D1-206ENST00000567379 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 A0A087WW49 117 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 C1orf196B1AJZ1 125 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 LGALS9O00182 355 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 CXCL1P09341 107 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 RPS10P46783 165 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 FOXL1Q12952 345 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 IBA57Q5T440 356 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 LCN12Q6JVE5 192 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 TMEM183AQ8IXX5 376 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 C4orf3Q8WVX3 66 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 WFDC12Q8WWY7 111 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 MRPL53Q96EL3 112 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 RHPN1-AS1Q9BWJ2 59 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 IL36BQ9NZH7 164 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 MLXQ9UH92 298 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 ZFP30Q9Y2G7 519 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 TLN2Q9Y4G6 2542 aa8.29□□□□□ -1.08
VPS9D1-206ENST00000567379 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 TRAV8-1A0A0A6YYK1 113 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 A0A1W2PPQ1 181 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 ZNF705GA8MUZ8 300 aaPredicted RBP8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 CHEK1O14757 476 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 RAB5BP61020 215 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 KHDC1LQ5JSQ8 128 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 DPF1Q92782 380 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 DAZAP1Q96EP5 407 aaKnown RBP8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 PYGO2Q9BRQ0 406 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 RNASE7Q9H1E1 156 aaKnown RBP8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 ZNF492Q9P255 531 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 V9GYV3 84 aa8.28□□□□□ -1.08
VPS9D1-206ENST00000567379 A8MWP6 167 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 LINC01619G3V211 115 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 WIPF1O43516 503 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 NDUFA7O95182 113 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 HLA-DMBP28068 263 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 HOXD3P31249 432 aaPredicted RBP8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 SYNJ2BPP57105 145 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 RPL19P84098 196 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 SAMD13Q5VXD3 122 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 IGFL4Q6B9Z1 124 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 MXRA5Q9NR99 2828 aa8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 SONP18583 2426 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-206ENST00000567379 IGKV2-40A0A087WW87 121 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 TRAV8-2A0A0B4J237 113 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 RBAKDNA6NC62 111 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 ZNF705FA8MVS1 300 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 M0QZ24 198 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 IGKV2D-40P01614 121 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 TCTEX1D4Q5JR98 221 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 SAPCD1Q5SSQ6 148 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 TCF24Q7RTU0 167 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 OR1N2Q8NGR9 330 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 LINC01006Q8NI28 216 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 WIPF2Q8TF74 440 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 NDFIP1Q9BT67 221 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
VPS9D1-206ENST00000567379 TMEM213A2RRL7 107 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 INAFM1C9JVW0 142 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 P01737 135 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 CT45A10P0DMU9 189 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 ID1P41134 155 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 KLF5Q13887 457 aaPredicted RBP8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 RNF182Q8N6D2 247 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 OR4B1Q8NGF8 309 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 SRD5A3Q9H8P0 318 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms