RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 PPP1R14DQ9NXH3 145 aa9.29□□□□□ -0.92
CNEP1R1-208ENST00000566482 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 NUPR2A6NF83 97 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 CRXO43186 299 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 OR7C2O60412 319 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 ACOT6Q3I5F7 207 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 INO80EQ8NBZ0 244 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 FXYD5Q96DB9 178 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
CNEP1R1-208ENST00000566482 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 LCE6AA0A183 80 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 M0R3E3 92 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 EIF3GO75821 320 aaKnown RBP eCLIP9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 INSP01308 110 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 OR10J4P0C629 311 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 M6PRP20645 277 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 KHDC3LQ587J8 217 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 HSD17B11Q8NBQ5 300 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 RNF141Q8WVD5 230 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 ZNF503Q96F45 646 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 TMEM208Q9BTX3 173 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 PRELID1Q9Y255 219 aa9.27□□□□□ -0.93
CNEP1R1-208ENST00000566482 DYNC2H1Q8NCM8 4307 aaKnown RBP9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 NPIPB6E9PJ23 425 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 HBE1P02100 147 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 ATP6V0CP27449 155 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 TAS2R45P59539 299 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 RAB2AP61019 212 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 UBE2L3P68036 154 aaKnown RBP9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 ICAM4Q14773 271 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 PHYHIPLQ96FC7 376 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
CNEP1R1-208ENST00000566482 LOC102723971A0A1B0GUV8 181 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 CDKN1BP46527 198 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 EMP1P54849 157 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 RRN3P1Q2M238 152 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 FAM122CQ6P4D5 195 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 RPP25LQ8N5L8 163 aaKnown RBP9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 OR10G4Q8NGN3 311 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 OR10G9Q8NGN4 311 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 OR10G7Q8NGN6 311 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 OR2G3Q8NGZ4 309 aa9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 PSMG3Q9BT73 122 aaPredicted RBP9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 KLK5Q9Y337 293 aaPredicted RBP9.25□□□□□ -0.93
CNEP1R1-208ENST00000566482 BORCS7-ASMTA0A0B4J1R7 106 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 A0A1W2PPV4 95 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 ZNF705GA8MUZ8 300 aaPredicted RBP9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 JTBO76095 146 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 PRM2P04554 102 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 TSPOP30536 169 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 ERCC8Q13216 396 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 KIR3DS1Q14943 382 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 RPL7L1Q6DKI1 246 aaKnown RBP9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 Q6ZTC4 211 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 ZNF767PQ75MW2 155 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 ODF3Q96PU9 254 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 SH3BGRL3Q9H299 93 aa9.24□□□□□ -0.93
CNEP1R1-208ENST00000566482 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 ARPC5O15511 151 aa9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 LEPP41159 167 aa9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 RANP62826 216 aaKnown RBP9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 C12orf74Q32Q52 190 aa9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 TMEM256Q8N2U0 113 aa9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 Q9H3A6 140 aa9.23□□□□□ -0.93
CNEP1R1-208ENST00000566482 J3KRW8 73 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 HMGB3O15347 200 aaKnown RBP9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 SERF2P84101 59 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 PQLC2Q6ZP29 291 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 LYPD1Q8N2G4 141 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 LINC01587Q99440 93 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 AGPAT4-IT1Q9H0P7 198 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 DKK2Q9UBU2 259 aa9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 YTHDF2Q9Y5A9 579 aaKnown RBP9.22□□□□□ -0.93
CNEP1R1-208ENST00000566482 TRAV10A0A0B4J240 114 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 C11orf94C9JXX5 98 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 MBP02144 154 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 ARL14EPLP0DKL9 152 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 AZU1P20160 251 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 FAM222AQ5U5X8 452 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 RAB24Q969Q5 203 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 LINC00477Q96M19 166 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 LYSTQ99698 3801 aa9.21□□□□□ -0.94
CNEP1R1-208ENST00000566482 VGLL1Q99990 258 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms