RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 H2BFSP57053 126 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 DAD1P61803 113 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 FCN2Q15485 313 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 LINC01587Q99440 93 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 PFDN5Q99471 154 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 NPCDR1Q9BY65 106 aa10.36□□□□□ -0.75
FANCA-220ENST00000566409 NDUFB4O95168 129 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 CDKN1BP46527 198 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 LRRC37A5PQ49AS3 106 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 OR5C1Q8NGR4 320 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 THAP6Q8TBB0 222 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 FAM210BQ96KR6 192 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 PPP1R14DQ9NXH3 145 aa10.35□□□□□ -0.75
FANCA-220ENST00000566409 PKD1P98161 4303 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 LYRM9A8MSI8 78 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 E5RGE8 158 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 PRAF2O60831 178 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 MPDU1O75352 247 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 P0DMU3 169 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 CT45A10P0DMU9 189 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 PYYP10082 97 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 TAS2R60P59551 318 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 GUK1Q16774 197 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 TMEM88Q6PEY1 159 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 TMEM14CQ9P0S9 112 aa10.34□□□□□ -0.75
FANCA-220ENST00000566409 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 TRBV19A0A075B6N1 114 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 M0R3E3 92 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 DEFB130BP0DP73 79 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 DEFB130AP0DP74 79 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 HTN1P15515 57 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 FAM167A-AS1Q96KT0 104 aa10.33□□□□□ -0.76
FANCA-220ENST00000566409 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 ZNF253O75346 499 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 RLN2P04090 185 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
FANCA-220ENST00000566409 CYCSP99999 105 aaKnown RBP10.32□□□□□ -0.76
FANCA-220ENST00000566409 CLINT1Q14677 625 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 RNASE8Q8TDE3 154 aaKnown RBP10.32□□□□□ -0.76
FANCA-220ENST00000566409 PPP1R1CQ8WVI7 109 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 SLC25A2Q9BXI2 301 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
FANCA-220ENST00000566409 H7BYZ3 331 aa10.31□□□□□ -0.76
FANCA-220ENST00000566409 MIR17HGQ75NE6 70 aa10.31□□□□□ -0.76
FANCA-220ENST00000566409 EXOC3-AS1Q8N2X6 119 aa10.31□□□□□ -0.76
FANCA-220ENST00000566409 C16orf74Q96GX8 76 aa10.31□□□□□ -0.76
FANCA-220ENST00000566409 WDR61Q9GZS3 305 aaKnown RBP10.31□□□□□ -0.76
FANCA-220ENST00000566409 J3KRW8 73 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 M0R2N4 97 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 MPC2O95563 127 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 ERCC8Q13216 396 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
FANCA-220ENST00000566409 ODF3Q96PU9 254 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
FANCA-220ENST00000566409 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
FANCA-220ENST00000566409 SSNA1O43805 119 aa10.29□□□□□ -0.76
FANCA-220ENST00000566409 PDE6HQ13956 83 aa10.29□□□□□ -0.76
FANCA-220ENST00000566409 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
FANCA-220ENST00000566409 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
FANCA-220ENST00000566409 FAM19A4Q96LR4 140 aa10.29□□□□□ -0.76
FANCA-220ENST00000566409 AGPAT4-IT1Q9H0P7 198 aa10.29□□□□□ -0.76
FANCA-220ENST00000566409 TIMM8BQ9Y5J9 83 aaPredicted RBP10.29□□□□□ -0.76
FANCA-220ENST00000566409 TRAV12-3A0A0B4J271 114 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 CBY3A6NI87 242 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 F5H768 121 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 RTL8CO15255 209 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 DEFA1P59665 94 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 DEFA3P59666 94 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 RNF212Q495C1 297 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 Q6ZR54 194 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 LINC00612Q8N6U2 182 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 FXYD5Q96DB9 178 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 ZNF503Q96F45 646 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 HSPB11Q9Y547 144 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 TIMM9Q9Y5J7 89 aa10.28□□□□□ -0.76
FANCA-220ENST00000566409 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 LEPP41159 167 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 ICAM4Q14773 271 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 LGALS9BQ3B8N2 356 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 UBE2DNLQ8IWF7 75 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 ATP5SQ99766 215 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 OR51M1Q9H341 326 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 BATF3Q9NR55 127 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 FUT9Q9Y231 359 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 PRELID1Q9Y255 219 aa10.27□□□□□ -0.77
FANCA-220ENST00000566409 KLLNB2CW77 178 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
FANCA-220ENST00000566409 ATP5G1P05496 136 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 OR10J4P0C629 311 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 ATP5G3P48201 142 aa10.26□□□□□ -0.77
FANCA-220ENST00000566409 CD300CQ08708 224 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms