RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 GIG44P09565 113 aaPredicted RBP9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 OR10J4P0C629 311 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 STAG3L2P0CL84 134 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 STAG3L3P0CL85 134 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 TSPOP30536 169 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 CNN1P51911 297 aaKnown RBP9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 UBE2L3P68036 154 aaKnown RBP9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 OR11H2Q8NH07 326 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 RXFP4Q8TDU9 374 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF471Q9BX82 626 aaPredicted RBP9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 SH3BGRL3Q9H299 93 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 RFNGQ9Y644 331 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 hCG_2014768A0A024R1R8 64 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 SMIM9A6NGZ8 99 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 F6UB75 175 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 H3BTX0 84 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 IGKV3-20P01619 116 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 TPT1P13693 172 aaKnown RBP9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 BAP18Q8IXM2 172 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 CSNK1G2-AS1Q8NCQ2 148 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 RETNQ9HD89 108 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 XCL2Q9UBD3 114 aa9.19□□□□□ -0.94
SHCBP1-204ENST00000565887 CTXND1A0A1B0GTU2 59 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF705FA8MVS1 300 aaPredicted RBP9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 MIFP14174 115 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 HLA-DMBP28068 263 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 ICAM4Q14773 271 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 AMTNQ6UX39 209 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 DPPA3Q6W0C5 159 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 STOML3Q8TAV4 291 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 SUN5Q8TC36 379 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF503Q96F45 646 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 IGF2BP2-AS1Q96M15 143 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 NEU1Q99519 415 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 GOLT1BQ9Y3E0 138 aa9.18□□□□□ -0.94
SHCBP1-204ENST00000565887 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 STAB2Q8WWQ8 2551 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 RBAKDNA6NC62 111 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 SLC25A5P05141 298 aaKnown RBP9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 DEFB1P60022 68 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 ZFP69Q49AA0 526 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 TMEM256Q8N2U0 113 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 EXOC3-AS1Q8N2X6 119 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 CMTM2Q8TAZ6 248 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 C20orf144Q9BQM9 153 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 NKX6-2Q9C056 277 aaPredicted RBP9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 Q9H3A6 140 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
SHCBP1-204ENST00000565887 TRBV7-9A0A0J9YWB2 115 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 PGPA6NDG6 321 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 C3orf84H3BNL1 204 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 BOLA2-SMG1P6H3BVE0 249 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 NMBP08949 121 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF705DP0CH99 300 aaPredicted RBP9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF705BP0CI00 300 aaPredicted RBP9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 ARL14EPLP0DKL9 152 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 GCHFRP30047 84 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 LEPP41159 167 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 CDKN1BP46527 198 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 RAB5CP51148 216 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 ZNF705AQ6ZN79 300 aaPredicted RBP9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 C9orf47Q6ZRZ4 202 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 SLC51BQ86UW2 128 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 SLC35B3Q9H1N7 401 aa9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 C11orf68Q9H3H3 251 aaKnown RBP9.16□□□□□ -0.94
SHCBP1-204ENST00000565887 SERTM2A0A1B0GWG4 89 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 TMEM189A5PLL7 270 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 M0R3E3 92 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 HMGB3O15347 200 aaKnown RBP9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 INSP01308 110 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 MUC7Q8TAX7 377 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
SHCBP1-204ENST00000565887 TENM3Q9P273 2699 aa9.15□□□□□ -0.95
SHCBP1-204ENST00000565887 A0A1W2PRE2 83 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 K7EQM0 130 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 FXYD7P58549 80 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 SPINK13Q1W4C9 94 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 TMED6Q8WW62 240 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
SHCBP1-204ENST00000565887 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 FBLL1A6NHQ2 334 aaKnown RBP9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 DIRC3C9JPN6 131 aa9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 TEX46H3BTG2 121 aa9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 HBE1P02100 147 aa9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 MBD3L1Q8WWY6 194 aa9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 AGPAT4-IT1Q9H0P7 198 aa9.13□□□□□ -0.95
SHCBP1-204ENST00000565887 X6R8D5 127 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms