RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
SMG1-211ENST00000565324 HLA-DRB4X5D2U9 266 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 STPG1Q5TH74 334 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 Q6ZVH6 145 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 C18orf32Q8TCD1 76 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 RPP25Q9BUL9 199 aaKnown RBP4.17□□□□□ -1.74
SMG1-211ENST00000565324 S4R3C0 116 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 A0A1W2PPI3 338 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 HGFACQ04756 655 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 C5orf47Q569G3 176 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 ZNF329Q86UD4 541 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 FAM216BQ8N7L0 139 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 CDKN1AP38936 164 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 IGHV3OR16-8A0A075B7F1 116 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 F8VRH5 84 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 EREGO14944 169 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 SLC25A16P16260 332 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 CRYBA4P53673 196 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 NDUFA12Q9UI09 145 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 TRAV25A0A0B4J276 109 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 ORMDL1Q9P0S3 153 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 SHISA3A0PJX4 238 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 SEC61GP60059 68 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 C20orf78Q9BR46 151 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 PCDH15Q96QU1 1955 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 FAM104BQ5XKR9 115 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 Q86TA4 180 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 TEN1Q86WV5 123 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 UTRNP46939 3433 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 SLC25A45Q8N413 288 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 C14orf178Q8N769 122 aaPredicted RBP4.16□□□□□ -1.74
SMG1-211ENST00000565324 DAZ1Q9NQZ3 744 aaKnown RBP4.16□□□□□ -1.74
SMG1-211ENST00000565324 C1QCP02747 245 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 NMSQ5H8A3 153 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 NUP210LQ5VU65 1888 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 H0YJW9 148 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 ZNF883P0CG24 379 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 C2orf66Q6UXQ4 117 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 PPP1R32Q7Z5V6 425 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 SAP25Q8TEE9 199 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 NPSP0C0P6 89 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 MP68P56378 58 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 SHANK2-AS3Q9BTD1 123 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 PLCE1Q9P212 2302 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 HS3ST6Q96QI5 342 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 A0A1W2PR77 199 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 PFN1P07737 140 aaKnown RBP4.16□□□□□ -1.74
SMG1-211ENST00000565324 VMO1Q7Z5L0 202 aa4.16□□□□□ -1.74
SMG1-211ENST00000565324 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 A0A1W2PRX2 142 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 PRSS47A8MTI9 375 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 B5MCH6 92 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 CSRP3P50461 194 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 PAQR4Q8N4S7 273 aaPredicted RBP4.15□□□□□ -1.74
SMG1-211ENST00000565324 BMPERQ8N8U9 685 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 GOLGB1Q14789 3259 aaKnown RBP4.15□□□□□ -1.74
SMG1-211ENST00000565324 ARMS2P0C7Q2 107 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 EIF4EBP2Q13542 120 aaPredicted RBP4.15□□□□□ -1.74
SMG1-211ENST00000565324 CDCP2Q5VXM1 449 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 MORN5Q5VZ52 161 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 PYGO2Q9BRQ0 406 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 A0A0A6YYD4 124 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 IGHV1-2P23083 117 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 FAM231DQ6ZW35 169 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 IGHV3OR16-10A0A075B7F0 116 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 ZCCHC24Q8N2G6 241 aaKnown RBP4.15□□□□□ -1.74
SMG1-211ENST00000565324 METRNQ9UJH8 293 aa4.15□□□□□ -1.74
SMG1-211ENST00000565324 RHOHQ15669 191 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 SIGLEC8Q9NYZ4 499 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 CACNA1HO95180 2353 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 IGHV3-73A0A0B4J1V6 119 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 A0A1B0GX51 115 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 J3QQQ9 107 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 NDUFB1O75438 58 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 RNASE6Q93091 150 aaKnown RBP4.15□□□□□ -1.75
SMG1-211ENST00000565324 NRTNQ99748 197 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 PSMB8P28062 276 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 C10orf91Q5T1B1 145 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 WFDC9Q8NEX5 89 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 TNRC6BQ9UPQ9 1833 aaKnown RBP4.15□□□□□ -1.75
SMG1-211ENST00000565324 ITGBL1O95965 494 aaPredicted RBP4.15□□□□□ -1.75
SMG1-211ENST00000565324 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 CELA2AP08217 269 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 HERV-K104P63124 156 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 VSIRQ9H7M9 311 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 CACNA1EQ15878 2313 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 COL11A2P13942 1736 aaPredicted RBP4.15□□□□□ -1.75
SMG1-211ENST00000565324 SMIM27A0A1W2PRY6 76 aa4.15□□□□□ -1.75
SMG1-211ENST00000565324 IGHV2-70DA0A0C4DH43 119 aa4.14□□□□□ -1.75
SMG1-211ENST00000565324 NTN3O00634 580 aaPredicted RBP4.14□□□□□ -1.75
SMG1-211ENST00000565324 MRPL51Q4U2R6 128 aaKnown RBP4.14□□□□□ -1.75
SMG1-211ENST00000565324 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
SMG1-211ENST00000565324 ATP6V0E2Q8NHE4 81 aa4.14□□□□□ -1.75
SMG1-211ENST00000565324 EP400Q96L91 3159 aa4.14□□□□□ -1.75
SMG1-211ENST00000565324 IGHV1-3A0A0C4DH29 117 aa4.14□□□□□ -1.75
SMG1-211ENST00000565324 IGKV1-9A0A0C4DH69 117 aa4.14□□□□□ -1.75
SMG1-211ENST00000565324 FOXI2Q6ZQN5 318 aa4.14□□□□□ -1.75
SMG1-211ENST00000565324 GVINP1Q7Z2Y8 2422 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms