RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LGALS9CQ6DKI2 356 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
LINC00554-201ENST00000564841 GFRA4Q9GZZ7 299 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 CGB3P0DN86 165 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 CGB7P0DN87 165 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
LINC00554-201ENST00000564841 IFI27L1Q96BM0 104 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 TPSG1Q9NRR2 321 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 IGLV1-44P01699 117 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 CACNG8Q8WXS5 425 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 KBTBD11-OT1A0A1B0GTJ5 212 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 SCGB1A1P11684 91 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 CRIP1P50238 77 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 SRRM5B3KS81 715 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 NDUFS7O75251 213 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 CHAC1Q9BUX1 264 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 GP9P14770 177 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
LINC00554-201ENST00000564841 SLC25A17O43808 307 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 RITA1Q96K30 269 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 RIGQ13278 110 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 ZFYVE26Q68DK2 2539 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 CCL3L1P16619 93 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
LINC00554-201ENST00000564841 ACACBO00763 2458 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 DPF1Q92782 380 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SPATA25Q9BR10 227 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 WI2-2373I1.2A0A1W2PRP0 233 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 K7ENP7 123 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SIVA1O15304 175 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 NPYP01303 97 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 LYZL1Q6UWQ5 148 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 IGLL5B9A064 214 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 HBDP02042 147 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 CD40P25942 277 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 FCER1GP30273 86 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
LINC00554-201ENST00000564841 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 M0R3E3 92 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 LYZP61626 148 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 MC5RP33032 325 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
LINC00554-201ENST00000564841 ZNF479Q96JC4 524 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 PKD1L2Q7Z442 2459 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 TNFRSF1AP19438 455 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 MAPKAPK5-AS1Q8N8E1 139 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 GLRXP35754 106 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 MBNL2Q5VZF2 373 aaKnown RBP12.84□□□□□ -0.35
LINC00554-201ENST00000564841 ZNF562Q6V9R5 426 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 IGFBPL1Q8WX77 278 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 E9PLD3 99 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 TNFAIP6P98066 277 aaPredicted RBP12.84□□□□□ -0.35
LINC00554-201ENST00000564841 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 THAP8Q8NA92 274 aa12.83□□□□□ -0.35
LINC00554-201ENST00000564841 PRSS1P07477 247 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 PAX8Q06710 450 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.83□□□□□ -0.36
LINC00554-201ENST00000564841 SPG11Q96JI7 2443 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 F8W1H4 67 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 MT-ATP8P03928 68 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 J3QR89 54 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 CEND1Q8N111 149 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 ORMDL3Q8N138 153 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 MSRB1Q9NZV6 116 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 EVI2AP22794 236 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 FHL3Q13643 280 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 SYT8Q8NBV8 401 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 MRAP2Q96G30 205 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 MSRB2Q9Y3D2 182 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 CKS2P33552 79 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 IGHV1-46P01743 117 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms