RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SUN5Q8TC36 379 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 ZNF503Q96F45 646 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 TMEM167BQ9NRX6 74 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 HUWE1Q7Z6Z7 4374 aaKnown RBP12.21□□□□□ -0.45
RNF40-206ENST00000564260 CNN1P51911 297 aaKnown RBP12.21□□□□□ -0.45
RNF40-206ENST00000564260 DEFB135Q30KP9 77 aa12.21□□□□□ -0.45
RNF40-206ENST00000564260 LGALSLQ3ZCW2 172 aaPredicted RBP12.21□□□□□ -0.45
RNF40-206ENST00000564260 ZFP69Q49AA0 526 aa12.21□□□□□ -0.45
RNF40-206ENST00000564260 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.45
RNF40-206ENST00000564260 RXFP4Q8TDU9 374 aa12.21□□□□□ -0.45
RNF40-206ENST00000564260 BLNKQ8WV28 456 aa12.21□□□□□ -0.45
RNF40-206ENST00000564260 WWC2-AS2Q96NR7 200 aa12.21□□□□□ -0.45
RNF40-206ENST00000564260 STAB2Q8WWQ8 2551 aa12.21□□□□□ -0.46
RNF40-206ENST00000564260 GIG44P09565 113 aaPredicted RBP12.2□□□□□ -0.46
RNF40-206ENST00000564260 OR10J4P0C629 311 aa12.2□□□□□ -0.46
RNF40-206ENST00000564260 CSN1S1P47710 185 aa12.2□□□□□ -0.46
RNF40-206ENST00000564260 RAB5CP51148 216 aa12.2□□□□□ -0.46
RNF40-206ENST00000564260 SLC51BQ86UW2 128 aa12.2□□□□□ -0.46
RNF40-206ENST00000564260 RFNGQ9Y644 331 aa12.2□□□□□ -0.46
RNF40-206ENST00000564260 TRBV7-9A0A0J9YWB2 115 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 ZNF705EA8MWA4 302 aaPredicted RBP12.19□□□□□ -0.46
RNF40-206ENST00000564260 F6UB75 175 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 SLC25A5P05141 298 aaKnown RBP12.19□□□□□ -0.46
RNF40-206ENST00000564260 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 AMTNQ6UX39 209 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 OTORQ9NRC9 128 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 NBEAL2Q6ZNJ1 2754 aa12.19□□□□□ -0.46
RNF40-206ENST00000564260 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 H3BTX0 84 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 BOLA2-SMG1P6H3BVE0 249 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 HLA-DMBP28068 263 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 TSPOP30536 169 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
RNF40-206ENST00000564260 LINC00477Q96M19 166 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 NEU1Q99519 415 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 RARRES2Q99969 163 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
RNF40-206ENST00000564260 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
RNF40-206ENST00000564260 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 SMIM9A6NGZ8 99 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 NMBP08949 121 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
RNF40-206ENST00000564260 MIFP14174 115 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 GCHFRP30047 84 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 ICAM4Q14773 271 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 PHYHIPLQ96FC7 376 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 IGF2BP2-AS1Q96M15 143 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 Q9H3A6 140 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
RNF40-206ENST00000564260 EDA2RQ9HAV5 297 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 PPP1R14DQ9NXH3 145 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 ARL2-SNX15V9GYD0 113 aa12.17□□□□□ -0.46
RNF40-206ENST00000564260 A0A1B0GVG6 124 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 A0A1W2PRE2 83 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 CDKN1BP46527 198 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 RANP62826 216 aaKnown RBP12.16□□□□□ -0.46
RNF40-206ENST00000564260 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
RNF40-206ENST00000564260 C9orf47Q6ZRZ4 202 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 TMEM256Q8N2U0 113 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 EXOC3-AS1Q8N2X6 119 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 TMED6Q8WW62 240 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 RETNQ9HD89 108 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
RNF40-206ENST00000564260 ZNF705FA8MVS1 300 aaPredicted RBP12.15□□□□□ -0.46
RNF40-206ENST00000564260 M0R3E3 92 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 INSP01308 110 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 DEFB1P60022 68 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 OR11H2Q8NH07 326 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 CMTM2Q8TAZ6 248 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 TCEAL7Q9BRU2 100 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 LENEPQ9Y5L5 61 aa12.15□□□□□ -0.46
RNF40-206ENST00000564260 FBLL1A6NHQ2 334 aaKnown RBP12.14□□□□□ -0.47
RNF40-206ENST00000564260 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 ZNF705DP0CH99 300 aaPredicted RBP12.14□□□□□ -0.47
RNF40-206ENST00000564260 ZNF705BP0CI00 300 aaPredicted RBP12.14□□□□□ -0.47
RNF40-206ENST00000564260 LEPP41159 167 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 TMEM78Q5T7P6 136 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 SLC35B3Q9H1N7 401 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
RNF40-206ENST00000564260 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
RNF40-206ENST00000564260 PRAC2D3DTV9 90 aa12.13□□□□□ -0.47
RNF40-206ENST00000564260 HMGB3O15347 200 aaKnown RBP12.13□□□□□ -0.47
RNF40-206ENST00000564260 PPT1P50897 306 aa12.13□□□□□ -0.47
RNF40-206ENST00000564260 C5orf17Q8NAS9 161 aa12.13□□□□□ -0.47
RNF40-206ENST00000564260 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
RNF40-206ENST00000564260 TMEM189A5PLL7 270 aa12.12□□□□□ -0.47
RNF40-206ENST00000564260 PGPA6NDG6 321 aa12.12□□□□□ -0.47
RNF40-206ENST00000564260 TEX46H3BTG2 121 aa12.12□□□□□ -0.47
RNF40-206ENST00000564260 CRISP2P16562 243 aa12.12□□□□□ -0.47
RNF40-206ENST00000564260 SPINK13Q1W4C9 94 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms