RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 RCHY1Q96PM5 261 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 SRSF8Q9BRL6 282 aaKnown RBP13.94□□□□□ -0.18
GDE1-203ENST00000564172 TEX48A0A1B0GUV7 120 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 CRXO43186 299 aaPredicted RBP13.94□□□□□ -0.18
GDE1-203ENST00000564172 BRI3O95415 125 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 NPPCP23582 126 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 MLANAQ16655 118 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 RPP25LQ8N5L8 163 aaKnown RBP13.94□□□□□ -0.18
GDE1-203ENST00000564172 ZNF114Q8NC26 417 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 ZNF418Q8TF45 676 aaPredicted RBP13.94□□□□□ -0.18
GDE1-203ENST00000564172 MS4A6AQ9H2W1 248 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 ZNF469Q96JG9 3925 aaPredicted RBP13.93□□□□□ -0.18
GDE1-203ENST00000564172 IER3P46695 156 aa13.93□□□□□ -0.18
GDE1-203ENST00000564172 GNG4P50150 75 aa13.93□□□□□ -0.18
GDE1-203ENST00000564172 KIAA1644Q3SXP7 199 aa13.93□□□□□ -0.18
GDE1-203ENST00000564172 NPCDR1Q9BY65 106 aa13.93□□□□□ -0.18
GDE1-203ENST00000564172 FAM181BA6NEQ2 426 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 FNDC10F2Z333 226 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 GPR183P32249 361 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 CD69Q07108 199 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 OR10AG1Q8NH19 301 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 RASL11BQ9BPW5 248 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 TXNDC17Q9BRA2 123 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 ZFHX3Q15911 3703 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 ITPR3Q14573 2671 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 MFAP2P55001 183 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 NDPQ00604 133 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 RAX2Q96IS3 184 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 GPR82Q96P67 336 aa13.92□□□□□ -0.18
GDE1-203ENST00000564172 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
GDE1-203ENST00000564172 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 C2orf70A6NJV1 201 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.91□□□□□ -0.18
GDE1-203ENST00000564172 FSHBP01225 129 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 RPL24P83731 157 aaKnown RBP13.91□□□□□ -0.18
GDE1-203ENST00000564172 GAGE5Q13069 117 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 GAGE6Q13070 117 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 Q56UQ5 140 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 TMEM219Q86XT9 240 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 SLC25A33Q9BSK2 321 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 SCRT2Q9NQ03 307 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 SS18L2Q9UHA2 77 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 F11RQ9Y624 299 aaKnown RBP13.91□□□□□ -0.18
GDE1-203ENST00000564172 MPDU1O75352 247 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 BCL6BQ8N143 479 aaPredicted RBP13.91□□□□□ -0.18
GDE1-203ENST00000564172 KCNIP2Q9NS61 270 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 ERG28Q9UKR5 140 aa13.91□□□□□ -0.18
GDE1-203ENST00000564172 C11orf94C9JXX5 98 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 SLC17A3O00476 420 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 SMAD7O15105 426 aaKnown RBP13.9□□□□□ -0.18
GDE1-203ENST00000564172 PAGE4O60829 102 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 EBLN2Q6P2I7 272 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 TEPPQ6URK8 271 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 JMJD8Q96S16 334 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 A0A1B0GW15 77 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 H3BUX3 64 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 OPRK1P41145 380 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 SPATA12Q7Z6I5 190 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 C5orf56Q8N8D9 126 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 MGST2Q99735 147 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 NAT8BQ9UHF3 227 aa13.9□□□□□ -0.18
GDE1-203ENST00000564172 ASPHD1Q5U4P2 390 aa13.89□□□□□ -0.19
GDE1-203ENST00000564172 FAM19A2Q8N3H0 131 aa13.89□□□□□ -0.19
GDE1-203ENST00000564172 OR2T6Q8NHC8 308 aa13.89□□□□□ -0.19
GDE1-203ENST00000564172 TMEM70Q9BUB7 260 aa13.89□□□□□ -0.19
GDE1-203ENST00000564172 MOB4Q9Y3A3 225 aa13.89□□□□□ -0.19
GDE1-203ENST00000564172 A0A0G2JLM5 398 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 OR4C46A6NHA9 309 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 HLA-DQA1P01909 254 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 EGR2P11161 476 aaPredicted RBP13.88□□□□□ -0.19
GDE1-203ENST00000564172 ARL3P36405 182 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 LY6EQ16553 131 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 RPEL1Q2QD12 228 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 DEFB112Q30KQ8 113 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 TMEM97Q5BJF2 176 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 ACSM6Q6P461 480 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 LY96Q9Y6Y9 160 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 TEX15Q9BXT5 2789 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 A6NDX4 124 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 NTF3P20783 257 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 TMEM136Q6ZRR5 245 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 GGTLC1Q9BX51 225 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 SPCS1Q9Y6A9 102 aa13.88□□□□□ -0.19
GDE1-203ENST00000564172 IGKV1OR2-108A0A075B7D4 117 aa13.87□□□□□ -0.19
GDE1-203ENST00000564172 A0A1W2PPM0 123 aa13.87□□□□□ -0.19
GDE1-203ENST00000564172 AMY1AP04745 511 aa13.87□□□□□ -0.19
GDE1-203ENST00000564172 SH2D7A6NKC9 451 aaPredicted RBP13.87□□□□□ -0.19
GDE1-203ENST00000564172 H3BUT2 72 aa13.87□□□□□ -0.19
GDE1-203ENST00000564172 IGHV3-48P01763 117 aa13.87□□□□□ -0.19
GDE1-203ENST00000564172 DEFA4P12838 97 aa13.87□□□□□ -0.19
GDE1-203ENST00000564172 SRIP30626 198 aa13.86□□□□□ -0.19
GDE1-203ENST00000564172 C9orf139Q6ZV77 190 aa13.86□□□□□ -0.19
GDE1-203ENST00000564172 TTC9CQ8N5M4 171 aa13.86□□□□□ -0.19
GDE1-203ENST00000564172 MRPL36Q9P0J6 103 aaKnown RBP13.86□□□□□ -0.19
GDE1-203ENST00000564172 NPIPB5A8MRT5 1133 aa13.86□□□□□ -0.19
GDE1-203ENST00000564172 HSBP1O75506 76 aa13.86□□□□□ -0.19
GDE1-203ENST00000564172 LCNL1Q6ZST4 164 aa13.86□□□□□ -0.19
GDE1-203ENST00000564172 GATAD1Q8WUU5 269 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms