RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FAAP20Q6NZ36 180 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 RNF182Q8N6D2 247 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 CCDC71LQ8N9Z2 235 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 ZFAND1Q8TCF1 268 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 TRGV9Q99603 122 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 PRR13Q9NZ81 148 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 U3KQ87 197 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 ZFP92A6NM28 416 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 RGS13O14921 159 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 GPX4P36969 197 aaPredicted RBP6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 MEOX2P50222 304 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 NCS1P62166 190 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 OR2F1Q13607 317 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM268Q5VZI3 342 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 OR8I2Q8N0Y5 310 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 LGI3Q8N145 548 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 DTD1Q8TEA8 209 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 LINC01587Q99440 93 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 RSG1Q9BU20 258 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 RBKSQ9H477 322 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 GPR132Q9UNW8 380 aa6.54□□□□□ -1.36
HDGFL3-204ENST00000563790 SNRPGP15A8MWD9 76 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 BOLA2-SMG1P6H3BVE0 249 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 PITX3O75364 302 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 SULT1A3P0DMM9 295 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 SULT1A4P0DMN0 295 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 HTN1P15515 57 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 CACNG7P62955 275 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 SURF2Q15527 256 aaPredicted RBP6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 GPR107Q5VW38 600 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 SAMD13Q5VXD3 122 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM229BQ8NBD8 167 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 OR4D5Q8NGN0 318 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 OR1B1Q8NGR6 318 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 RNASE11Q8TAA1 199 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 IL22RA2Q969J5 263 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 C16orf92Q96LL3 132 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 SLC45A2Q9UMX9 530 aa6.53□□□□□ -1.36
HDGFL3-204ENST00000563790 SMIM31A0A1B0GVY4 71 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 H3BS24 57 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 DUSP14O95147 198 aaKnown RBP6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 RAB3DO95716 219 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 CXCL3P19876 107 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 SCGB2B2Q4G0G5 96 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 LYZL2Q7Z4W2 148 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 GPR141Q7Z602 305 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 NOXA1Q86UR1 476 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
HDGFL3-204ENST00000563790 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 H3BRN7 92 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 MRPS12O15235 138 aaKnown RBP6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 GALR1P47211 349 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 ATP5IP56385 69 aaPredicted RBP6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 TAS2R19P59542 299 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 VBP1P61758 197 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 OR8A1Q8NGG7 326 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 ATP6V0E2Q8NHE4 81 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 RNF185Q96GF1 192 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 MIXL1Q9H2W2 232 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 SLC25A22Q9H936 323 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 PRO0255Q9UI72 69 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 COX11Q9Y6N1 276 aa6.51□□□□□ -1.37
HDGFL3-204ENST00000563790 A0A087WYN8 130 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 CCR6P51684 374 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 SMCO1Q147U7 214 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 Q6ZTI0 123 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 ZBTB8BQ8NAP8 495 aaPredicted RBP6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 BLNKQ8WV28 456 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 SLC35E1Q96K37 410 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 FUNDC2Q9BWH2 189 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 CACFD1Q9UGQ2 172 aa6.5□□□□□ -1.37
HDGFL3-204ENST00000563790 A0A087X0K7 114 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 GABARAPH6UMI1 98 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 PRAF2O60831 178 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 GABARAPO95166 117 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 TNFAIP8O95379 198 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 ATP6V1G2O95670 118 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 SRIP30626 198 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 CRYBA4P53673 196 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 C9orf163Q8N9P6 203 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 GPR82Q96P67 336 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 SHANK2-AS3Q9BTD1 123 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 PARD6GQ9BYG4 376 aaPredicted RBP6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 EXTL2Q9UBQ6 330 aa6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 C14orf166Q9Y224 244 aaKnown RBP6.49□□□□□ -1.37
HDGFL3-204ENST00000563790 H7BYZ3 331 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 K7EQD1 137 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 CFDP00746 253 aaPredicted RBP6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 FABP1P07148 127 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 PLP1P60201 277 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 HIST1H1AQ02539 215 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms