RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CHCHD1Q96BP2 118 aaKnown RBP0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 LINC00052Q96N35 136 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 ZNF714Q96N38 554 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 CCDC115Q96NT0 180 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 MRPL57Q9BQC6 102 aaKnown RBP0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 LXNQ9BS40 222 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 KLK9Q9UKQ9 250 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 COL6A6A6NMZ7 2263 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 NUP210Q8TEM1 1887 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 A2MP01023 1474 aa0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 TCOF1Q13428 1488 aaKnown RBP0.6□□□□□ -2.31
HMGB1P33-201ENST00000563485 POLEQ07864 2286 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 MUC4Q99102 2169 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 UNC13CQ8NB66 2214 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 IGKV2D-26A0A0A0MRZ7 120 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 IGLV3-32A0A0A0MS00 114 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 TRBV6-8A0A0A6YYG3 113 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 TRBV6-4A0A1B0GX49 114 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 ODAMA1E959 279 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 A6NN06 94 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 M0R233 179 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 CCL4P13236 92 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 COX7CP15954 63 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 RPL22P35268 128 aaKnown RBP0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 GTF2A1P52655 376 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 MSMO1Q15800 293 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 MPV17LQ2QL34 196 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 CCSMST1Q4G0I0 132 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 LINC00269Q8N2A0 174 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 C15orf53Q8NAA6 179 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 TMEM35BQ8NCS4 154 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 MORN4Q8NDC4 146 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 OR4K15Q8NH41 348 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 C10orf105Q8TEF2 133 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 MRPL40Q9NQ50 206 aaKnown RBP0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 ORMDL1Q9P0S3 153 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 HSPB8Q9UJY1 196 aa0.59□□□□□ -2.31
HMGB1P33-201ENST00000563485 CEP192Q8TEP8 1941 aa0.59□□□□□ -2.32
HMGB1P33-201ENST00000563485 NOTCH1P46531 2555 aa0.59□□□□□ -2.32
HMGB1P33-201ENST00000563485 MCM3APO60318 1980 aa0.59□□□□□ -2.32
HMGB1P33-201ENST00000563485 ANKRD31Q8N7Z5 1873 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 MED23Q9ULK4 1368 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 HEATR1Q9H583 2144 aaKnown RBP0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 LAMB4A4D0S4 1761 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 TRAV36DV7A0A075B6V5 113 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR2T8A6NH00 312 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 J3KT08 172 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 GEMIN2O14893 280 aaKnown RBP0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 SAA1P0DJI8 122 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 RPL7P18124 248 aaKnown RBP0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 DEFB115Q30KQ5 88 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 MORN2Q502X0 79 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 GDF5OSQ5U4N7 250 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 TMEM14EPQ6UXP3 125 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 LRRC18Q8N456 261 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 TMEM229BQ8NBD8 167 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR5A2Q8NGI9 324 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 RAB37Q96AX2 223 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 TAF9BQ9HBM6 251 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 JPT1Q9UK76 154 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 CECR2Q9BXF3 1484 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 ALPK3Q96L96 1907 aa0.58□□□□□ -2.32
HMGB1P33-201ENST00000563485 ASCC3Q8N3C0 2202 aaKnown RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 TRAV13-1A0A0B4J241 112 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 A0A0J9YY99 117 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 LOC107984640A0A0U1RRK4 108 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 LOC105371267A0A1B0GV96 52 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 H3BMG7 143 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 K7ERJ3 54 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 DEGS1O15121 323 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 DBIP07108 87 aaKnown RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 FABP4P15090 132 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 MAXP61244 160 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 LSM3P62310 102 aaKnown RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 QRFPP83859 136 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 FAM74A1Q5RGS3 127 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 Q5XG85 94 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 HAGHLQ6PII5 290 aaPredicted RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 TEX261Q6UWH6 196 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 IZUMO2Q6UXV1 221 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 LINC00322Q6ZN03 302 aaPredicted RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 CLECL1Q8IZS7 167 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 FAM19A2Q8N3H0 131 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 Q8TAT8 98 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 PRELID3AQ96N28 172 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 AIF1LQ9BQI0 150 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 CST11Q9H112 138 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 CBLN4Q9NTU7 201 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 TPRKBQ9Y3C4 175 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 U3KQ87 197 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 COL24A1Q17RW2 1714 aa0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 CHD3Q12873 2000 aaKnown RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 XIRP1Q702N8 1843 aaKnown RBP0.57□□□□□ -2.32
HMGB1P33-201ENST00000563485 WDR97A6NE52 1622 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 FER1L6Q2WGJ9 1857 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 OVOS2A0A0G2JMS6 1433 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 FAM135BQ49AJ0 1406 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms