RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ZNF329Q86UD4 541 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 TEN1Q86WV5 123 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 MAL2Q969L2 176 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 HDHD3Q9BSH5 251 aaPredicted RBP3.55□□□□□ -1.84
SMG1-207ENST00000563235 SND1-IT1Q9HBX3 110 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 ZNF492Q9P255 531 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 HLA-DRB4X5D2U9 266 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 ANKRD12Q6UB98 2062 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 C3orf85A0A1B0GTC6 90 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 BUB1B-PAK6H3BSN5 160 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 H3BT86 120 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 TRACP01848 142 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 TAS2R45P59539 299 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 SS18Q15532 418 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 SLC25A42Q86VD7 318 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 ZNF101Q8IZC7 436 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 FLVCR1-AS1Q8TAF5 88 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 EML6Q6ZMW3 1958 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 MAST4O15021 2626 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 CA7P43166 264 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 GNB2P62879 340 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 Q6ZRP5 223 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 MDP1Q86V88 176 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 MORN4Q8NDC4 146 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 BCL2L10Q9HD36 194 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 EPDR1Q9UM22 224 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 HCFC1P51610 2035 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 IGKV1-9A0A0C4DH69 117 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 INS-IGF2F8WCM5 200 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 IGLV3-27P01718 113 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 IGHV3-43DP0DP04 118 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 ZNF791Q3KP31 576 aaPredicted RBP3.54□□□□□ -1.84
SMG1-207ENST00000563235 MORN3Q6PF18 240 aaPredicted RBP3.54□□□□□ -1.84
SMG1-207ENST00000563235 IGFL3Q6UXB1 125 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 SCGB1C1Q8TD33 95 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 S100A16Q96FQ6 103 aaKnown RBP3.54□□□□□ -1.84
SMG1-207ENST00000563235 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 CSAG2Q9Y5P2 127 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 ACACBO00763 2458 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 F8W1H4 67 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 HSPB1P04792 205 aaKnown RBP3.54□□□□□ -1.84
SMG1-207ENST00000563235 SYNJ2BPP57105 145 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 Q6ZS92 163 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 FP248Q71RG6 208 aaPredicted RBP3.54□□□□□ -1.84
SMG1-207ENST00000563235 BPIFA4PQ86YQ2 179 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
SMG1-207ENST00000563235 LINC01555Q8NAE3 123 aa3.54□□□□□ -1.84
SMG1-207ENST00000563235 ZNF292O60281 2723 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 TECTAO75443 2155 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 ZNF462Q96JM2 2506 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 ZFHX2Q9C0A1 2572 aaPredicted RBP3.53□□□□□ -1.84
SMG1-207ENST00000563235 OR10P1Q8NGE3 313 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 TAF15Q92804 592 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMG1-207ENST00000563235 TVP23CQ96ET8 276 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 OR5V1Q9UGF6 321 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 PLXNA4Q9HCM2 1894 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 GON4LQ3T8J9 2241 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 FAM186AA6NE01 2351 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 FAM72CH0Y354 149 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 SNCGO76070 127 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 SRP19P09132 144 aaKnown RBP3.53□□□□□ -1.84
SMG1-207ENST00000563235 IL9P15248 144 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 CDK5R1Q15078 307 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 FAM72AQ5TYM5 149 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 MIC13Q5XKP0 118 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 FAM72DQ6L9T8 149 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
SMG1-207ENST00000563235 FAM72BQ86X60 149 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 NKAPP1Q8N9T2 125 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 ZNF581Q9P0T4 197 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 LINC00588Q9Y4M8 146 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 CENPFP49454 3210 aa3.53□□□□□ -1.84
SMG1-207ENST00000563235 MAP1BP46821 2468 aaKnown RBP3.53□□□□□ -1.85
SMG1-207ENST00000563235 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 ORMDL2Q53FV1 153 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 ADAMTSL4-AS1Q5T5F5 129 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 AQP3Q92482 292 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 PLA2G12AQ9BZM1 189 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 FAM60AQ9NP50 221 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 CMC2Q9NRP2 79 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 DNAJC9-AS1A6NH13 148 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 ERVK-16P61578 105 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 NOXRED1Q6NXP6 359 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 CEMP1Q6PRD7 247 aaPredicted RBP3.52□□□□□ -1.85
SMG1-207ENST00000563235 CLECL1Q8IZS7 167 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 OR5H2Q8NGV7 314 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 SPANXDQ9BXN6 97 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 FASNP49327 2511 aaKnown RBP3.52□□□□□ -1.85
SMG1-207ENST00000563235 DOCK7Q96N67 2140 aa3.52□□□□□ -1.85
SMG1-207ENST00000563235 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
SMG1-207ENST00000563235 TCL1BO95988 128 aa3.51□□□□□ -1.85
SMG1-207ENST00000563235 LTAP01374 205 aa3.51□□□□□ -1.85
SMG1-207ENST00000563235 IGKV1-16P04430 117 aa3.51□□□□□ -1.85
SMG1-207ENST00000563235 BSPH1Q075Z2 132 aa3.51□□□□□ -1.85
SMG1-207ENST00000563235 ADIRFQ15847 76 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms