RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 CMTM2Q8TAZ6 248 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 WIPF2Q8TF74 440 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-208ENST00000563220 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 NF1P21359 2839 aa13.77□□□□□ -0.2
COMMD4-208ENST00000563220 HIVEP1P15822 2718 aa13.77□□□□□ -0.21
COMMD4-208ENST00000563220 RPEL1Q2QD12 228 aa13.77□□□□□ -0.21
COMMD4-208ENST00000563220 IGFL4Q6B9Z1 124 aa13.77□□□□□ -0.21
COMMD4-208ENST00000563220 IGHV4OR15-8A0A075B7B6 117 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 A0A087WW49 117 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 TYMSP04818 313 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 PSG9Q00887 426 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 OR5I1Q13606 314 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 DNLZQ5SXM8 178 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 IMMP2LQ96T52 175 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 ZNF331Q9NQX6 463 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-208ENST00000563220 ZNF253O75346 499 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 EDN2P20800 178 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 GOLT1AQ6ZVE7 132 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 BAGE2Q86Y30 109 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 NHLRC2Q8NBF2 726 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 LINC01006Q8NI28 216 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 BTF3L4Q96K17 158 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 C16orf95Q9H693 158 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 AAMDCQ9H7C9 122 aa13.76□□□□□ -0.21
COMMD4-208ENST00000563220 DAZ1Q9NQZ3 744 aaKnown RBP13.76□□□□□ -0.21
COMMD4-208ENST00000563220 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
COMMD4-208ENST00000563220 K7EMT4 169 aa13.75□□□□□ -0.21
COMMD4-208ENST00000563220 HLA-DMBP28068 263 aa13.75□□□□□ -0.21
COMMD4-208ENST00000563220 FAM3BP58499 235 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-208ENST00000563220 UBE2G1P62253 170 aa13.75□□□□□ -0.21
COMMD4-208ENST00000563220 SFRP2Q96HF1 295 aa13.75□□□□□ -0.21
COMMD4-208ENST00000563220 TRAV8-1A0A0A6YYK1 113 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 DIRC3C9JPN6 131 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 IGLV2-11P01706 119 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 COA6Q5JTJ3 125 aaKnown RBP13.74□□□□□ -0.21
COMMD4-208ENST00000563220 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 GCGP01275 180 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 KCNIP4Q6PIL6 250 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 FMC1Q96HJ9 113 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 SMPXQ9UHP9 88 aa13.74□□□□□ -0.21
COMMD4-208ENST00000563220 A0A1W2PS18 150 aa13.73□□□□□ -0.21
COMMD4-208ENST00000563220 HOXD3P31249 432 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-208ENST00000563220 DEFB136Q30KP8 78 aa13.73□□□□□ -0.21
COMMD4-208ENST00000563220 PYY3Q5JQD4 70 aa13.73□□□□□ -0.21
COMMD4-208ENST00000563220 CHEK1O14757 476 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 MGST1P10620 155 aaKnown RBP13.72□□□□□ -0.21
COMMD4-208ENST00000563220 SYNJ2BPP57105 145 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 JMJD8Q96S16 334 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 UFC1Q9Y3C8 167 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 TRAV8-2A0A0B4J237 113 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 TMEM213A2RRL7 107 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 ZNF705FA8MVS1 300 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-208ENST00000563220 LTAP01374 205 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 KHDC1LQ5JSQ8 128 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 OR10G8Q8NGN5 311 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 C4orf3Q8WVX3 66 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 GRAMD2BQ96HH9 432 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 MLST8Q9BVC4 326 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 SELENOKQ9Y6D0 94 aa13.72□□□□□ -0.21
COMMD4-208ENST00000563220 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 CSN1S1P47710 185 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 FOXL1Q12952 345 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 REC114Q7Z4M0 266 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 TMEM183AQ8IXX5 376 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 RNF182Q8N6D2 247 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 C11orf44Q8N8P7 122 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 OR10D4PQ8NGN7 298 aa13.71□□□□□ -0.21
COMMD4-208ENST00000563220 RNASE7Q9H1E1 156 aaKnown RBP13.71□□□□□ -0.21
COMMD4-208ENST00000563220 CD28P10747 220 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 ERVFC1-1P60608 527 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 ACTL10Q5JWF8 245 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 LCN12Q6JVE5 192 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 TMEM75Q8N9X5 138 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 SLC50A1Q9BRV3 221 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 A0A1W2PPQ1 181 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 LGALS9O00182 355 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
COMMD4-208ENST00000563220 KLF5Q13887 457 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-208ENST00000563220 PSG3Q16557 428 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 Q86TA4 180 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 OR11H1Q8NG94 326 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 DUX3Q96PT4 197 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 ASCL2Q99929 193 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 PSG8Q9UQ74 426 aa13.7□□□□□ -0.22
COMMD4-208ENST00000563220 FN1P02751 2386 aaKnown RBP13.69□□□□□ -0.22
COMMD4-208ENST00000563220 IGKV2-40A0A087WW87 121 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-208ENST00000563220 TRBV6-1A0A0K0K1D8 114 aa13.69□□□□□ -0.22
COMMD4-208ENST00000563220 NDUFA7O95182 113 aa13.69□□□□□ -0.22
COMMD4-208ENST00000563220 IGKV2D-40P01614 121 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-208ENST00000563220 SLURP1P55000 103 aa13.69□□□□□ -0.22
COMMD4-208ENST00000563220 KLHL30-AS1Q8NEE0 82 aa13.69□□□□□ -0.22
COMMD4-208ENST00000563220 A8MWP6 167 aa13.68□□□□□ -0.22
COMMD4-208ENST00000563220 PRAC2D3DTV9 90 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms