RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 OTORQ9NRC9 128 aa13.91□□□□□ -0.18
RAB40C-207ENST00000563109 HLA-DRB4X5D2U9 266 aa13.91□□□□□ -0.18
RAB40C-207ENST00000563109 A0A0J9YX75 114 aa13.9□□□□□ -0.18
RAB40C-207ENST00000563109 RBMY1BA6NDE4 496 aaKnown RBP13.9□□□□□ -0.18
RAB40C-207ENST00000563109 RBMY1EA6NEQ0 496 aaKnown RBP13.9□□□□□ -0.18
RAB40C-207ENST00000563109 ZNF705EA8MWA4 302 aaPredicted RBP13.9□□□□□ -0.18
RAB40C-207ENST00000563109 DUSP14O95147 198 aaKnown RBP13.9□□□□□ -0.18
RAB40C-207ENST00000563109 RBMY1DP0C7P1 496 aaKnown RBP13.9□□□□□ -0.18
RAB40C-207ENST00000563109 DEFB1P60022 68 aa13.9□□□□□ -0.18
RAB40C-207ENST00000563109 A0A1B0GV50 99 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 ZNF705FA8MVS1 300 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-207ENST00000563109 F6UB75 175 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 H3BMM0 161 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 HBE1P02100 147 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 HIST1H1AQ02539 215 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-207ENST00000563109 GDF5OSQ5U4N7 250 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 TRPT1Q86TN4 253 aaKnown RBP13.89□□□□□ -0.19
RAB40C-207ENST00000563109 OR8A1Q8NGG7 326 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 OR10J6PQ8NGY7 276 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 CMTM2Q8TAZ6 248 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 TMPRSS5Q9H3S3 457 aa13.89□□□□□ -0.19
RAB40C-207ENST00000563109 PGPA6NDG6 321 aa13.88□□□□□ -0.19
RAB40C-207ENST00000563109 M0R3E3 92 aa13.88□□□□□ -0.19
RAB40C-207ENST00000563109 OR4B1Q8NGF8 309 aa13.88□□□□□ -0.19
RAB40C-207ENST00000563109 RXFP4Q8TDU9 374 aa13.88□□□□□ -0.19
RAB40C-207ENST00000563109 FBN3Q75N90 2809 aa13.88□□□□□ -0.19
RAB40C-207ENST00000563109 KIR2DL5BA0A0G2JN68 375 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 KIR2DL5BA0A0G2JPC4 375 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 A0A1W2PRE2 83 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 IGKV3-20P01619 116 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 PPT1P50897 306 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 UBE2G2P60604 165 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 NUTF2P61970 127 aaKnown RBP13.87□□□□□ -0.19
RAB40C-207ENST00000563109 MORN3Q6PF18 240 aaPredicted RBP13.87□□□□□ -0.19
RAB40C-207ENST00000563109 LINC00322Q6ZN03 302 aaPredicted RBP13.87□□□□□ -0.19
RAB40C-207ENST00000563109 KIR2DL5AQ8N109 375 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 KIR2DL5BQ8NHK3 375 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 B9D2Q9BPU9 175 aa13.87□□□□□ -0.19
RAB40C-207ENST00000563109 MEGF8Q7Z7M0 2845 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 ZNF705DP0CH99 300 aaPredicted RBP13.86□□□□□ -0.19
RAB40C-207ENST00000563109 ZNF705BP0CI00 300 aaPredicted RBP13.86□□□□□ -0.19
RAB40C-207ENST00000563109 CNN1P51911 297 aaKnown RBP13.86□□□□□ -0.19
RAB40C-207ENST00000563109 BLOC1S1P78537 153 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 CLUHP3Q96NS8 147 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 PPP1R14DQ9NXH3 145 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 RPH3ALQ9UNE2 315 aa13.86□□□□□ -0.19
RAB40C-207ENST00000563109 IFNA7P01567 189 aa13.85□□□□□ -0.19
RAB40C-207ENST00000563109 SLC25A5P05141 298 aaKnown RBP13.85□□□□□ -0.19
RAB40C-207ENST00000563109 PRB4P10163 310 aaPredicted RBP13.85□□□□□ -0.19
RAB40C-207ENST00000563109 HAGHQ16775 308 aa13.85□□□□□ -0.19
RAB40C-207ENST00000563109 TEX261Q6UWH6 196 aa13.85□□□□□ -0.19
RAB40C-207ENST00000563109 C5orf17Q8NAS9 161 aa13.85□□□□□ -0.19
RAB40C-207ENST00000563109 NKX6-2Q9C056 277 aaPredicted RBP13.85□□□□□ -0.19
RAB40C-207ENST00000563109 CSTL1Q9H114 145 aa13.85□□□□□ -0.19
RAB40C-207ENST00000563109 ARL2-SNX15V9GYD0 113 aa13.85□□□□□ -0.19
RAB40C-207ENST00000563109 UBE2CO00762 179 aa13.84□□□□□ -0.19
RAB40C-207ENST00000563109 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
RAB40C-207ENST00000563109 ARL6IP6Q8N6S5 226 aa13.84□□□□□ -0.19
RAB40C-207ENST00000563109 YTHDF2Q9Y5A9 579 aaKnown RBP13.84□□□□□ -0.19
RAB40C-207ENST00000563109 AGRNO00468 2067 aa13.84□□□□□ -0.19
RAB40C-207ENST00000563109 IGKV2-40A0A087WW87 121 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-207ENST00000563109 FAM74A7A6NL05 159 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 GGTLC3B5MD39 225 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 IFNA1P01562 189 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 IGKV2D-40P01614 121 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-207ENST00000563109 SUMO1P63165 101 aaKnown RBP13.83□□□□□ -0.2
RAB40C-207ENST00000563109 CST9LP1Q5W188 147 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 SBSPONQ8IVN8 264 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 ASCL2Q99929 193 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 MANBALQ9NQG1 85 aa13.83□□□□□ -0.2
RAB40C-207ENST00000563109 A8MTW9 85 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 DIRC3C9JPN6 131 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 NPIPB6E9PJ23 425 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 ZNF680Q8NEM1 530 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 GNG13Q9P2W3 67 aa13.82□□□□□ -0.2
RAB40C-207ENST00000563109 SERTM2A0A1B0GWG4 89 aa13.81□□□□□ -0.2
RAB40C-207ENST00000563109 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
RAB40C-207ENST00000563109 K7EQM0 130 aa13.81□□□□□ -0.2
RAB40C-207ENST00000563109 PAGE4O60829 102 aa13.81□□□□□ -0.2
RAB40C-207ENST00000563109 GNG5P63218 68 aa13.81□□□□□ -0.2
RAB40C-207ENST00000563109 LINC00477Q96M19 166 aa13.81□□□□□ -0.2
RAB40C-207ENST00000563109 AMBPP02760 352 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 ERCC8Q13216 396 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 GOLT1AQ6ZVE7 132 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 SPATA25Q9BR10 227 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 TCEAL7Q9BRU2 100 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 SLC35B3Q9H1N7 401 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 ZMAT4Q9H898 229 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 EPDR1Q9UM22 224 aa13.8□□□□□ -0.2
RAB40C-207ENST00000563109 TCRAP04437 139 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 NHLRC4P0CG21 123 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-207ENST00000563109 TSPOP30536 169 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 FXYD7P58549 80 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 CCL20P78556 96 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 AMTNQ6UX39 209 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms