RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 PMS2P11Q13670 270 aa13.43□□□□□ -0.26
CDH11-206ENST00000562998 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
CDH11-206ENST00000562998 OR2G3Q8NGZ4 309 aa13.43□□□□□ -0.26
CDH11-206ENST00000562998 PRELID1Q9Y255 219 aa13.43□□□□□ -0.26
CDH11-206ENST00000562998 NUPR2A6NF83 97 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 NPIPB6E9PJ23 425 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 M0R3E3 92 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 M6PRP20645 277 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 RHOBP62745 196 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 PHLDA1Q8WV24 401 aaPredicted RBP13.42□□□□□ -0.26
CDH11-206ENST00000562998 RNF141Q8WVD5 230 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
CDH11-206ENST00000562998 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 GOLT1BQ9Y3E0 138 aa13.42□□□□□ -0.26
CDH11-206ENST00000562998 DNAH1Q9P2D7 4330 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 FXYD6-FXYD2A0A087WZ82 144 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 LCE6AA0A183 80 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 OR10J4P0C629 311 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 ACOT6Q3I5F7 207 aaPredicted RBP13.41□□□□□ -0.26
CDH11-206ENST00000562998 BAP18Q8IXM2 172 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 INO80EQ8NBZ0 244 aaPredicted RBP13.41□□□□□ -0.26
CDH11-206ENST00000562998 BLNKQ8WV28 456 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 ODF3Q96PU9 254 aa13.41□□□□□ -0.26
CDH11-206ENST00000562998 IGHV3OR16-12A0A075B7B8 117 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 INSP01308 110 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 ATP6V0CP27449 155 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 RAB2AP61019 212 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 OR10J6PQ8NGY7 276 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 PHYHIPLQ96FC7 376 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 CELA1Q9UNI1 258 aa13.4□□□□□ -0.26
CDH11-206ENST00000562998 TRAV12-2A0A075B6T6 113 aa13.39□□□□□ -0.27
CDH11-206ENST00000562998 TMEM189A5PLL7 270 aa13.39□□□□□ -0.27
CDH11-206ENST00000562998 CT45A10P0DMU9 189 aa13.39□□□□□ -0.27
CDH11-206ENST00000562998 CDKN1BP46527 198 aa13.39□□□□□ -0.27
CDH11-206ENST00000562998 KHDC3LQ587J8 217 aa13.39□□□□□ -0.27
CDH11-206ENST00000562998 HSD17B11Q8NBQ5 300 aa13.39□□□□□ -0.27
CDH11-206ENST00000562998 OR7C2O60412 319 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 TAS2R45P59539 299 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 SERF2P84101 59 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 ICAM4Q14773 271 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 KIR3DS1Q14943 382 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 RPL7L1Q6DKI1 246 aaKnown RBP13.38□□□□□ -0.27
CDH11-206ENST00000562998 LYPD1Q8N2G4 141 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 RPP25LQ8N5L8 163 aaKnown RBP13.38□□□□□ -0.27
CDH11-206ENST00000562998 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 ALMS1Q8TCU4 4167 aa13.38□□□□□ -0.27
CDH11-206ENST00000562998 EIF3GO75821 320 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH11-206ENST00000562998 HBE1P02100 147 aa13.37□□□□□ -0.27
CDH11-206ENST00000562998 C12orf74Q32Q52 190 aa13.37□□□□□ -0.27
CDH11-206ENST00000562998 OR10G4Q8NGN3 311 aa13.37□□□□□ -0.27
CDH11-206ENST00000562998 OR10G9Q8NGN4 311 aa13.37□□□□□ -0.27
CDH11-206ENST00000562998 OR10G7Q8NGN6 311 aa13.37□□□□□ -0.27
CDH11-206ENST00000562998 SH3BGRL3Q9H299 93 aa13.37□□□□□ -0.27
CDH11-206ENST00000562998 SMLR1H3BR10 107 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 TSPOP30536 169 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
CDH11-206ENST00000562998 RRN3P1Q2M238 152 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 PQLC2Q6ZP29 291 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 C9orf47Q6ZRZ4 202 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 TMEM256Q8N2U0 113 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 C20orf144Q9BQM9 153 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 AGPAT4-IT1Q9H0P7 198 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 PPP1R14DQ9NXH3 145 aa13.36□□□□□ -0.27
CDH11-206ENST00000562998 LOC102723971A0A1B0GUV8 181 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 A0A1W2PPV4 95 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 ARPC5O15511 151 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 PRM2P04554 102 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 STAG3L2P0CL84 134 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 STAG3L3P0CL85 134 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 ERCC8Q13216 396 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 FAM122CQ6P4D5 195 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 Q6ZTC4 211 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 OR11H4Q8NGC9 324 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 GNPNAT1Q96EK6 184 aaPredicted RBP13.35□□□□□ -0.27
CDH11-206ENST00000562998 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 DKK2Q9UBU2 259 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
CDH11-206ENST00000562998 HYDINQ4G0P3 5121 aa13.35□□□□□ -0.27
CDH11-206ENST00000562998 BORCS7-ASMTA0A0B4J1R7 106 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 PLAC8L1A1L4L8 177 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
CDH11-206ENST00000562998 TAAR5O14804 337 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
CDH11-206ENST00000562998 GFI1BQ5VTD9 330 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 TMEM208Q9BTX3 173 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 Q9H3A6 140 aa13.34□□□□□ -0.27
CDH11-206ENST00000562998 YTHDF2Q9Y5A9 579 aaKnown RBP13.34□□□□□ -0.27
CDH11-206ENST00000562998 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
CDH11-206ENST00000562998 HMSDA8MTL9 139 aa13.33□□□□□ -0.28
CDH11-206ENST00000562998 KLLNB2CW77 178 aa13.33□□□□□ -0.28
CDH11-206ENST00000562998 JTBO76095 146 aa13.33□□□□□ -0.28
CDH11-206ENST00000562998 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
CDH11-206ENST00000562998 MBP02144 154 aa13.33□□□□□ -0.28
CDH11-206ENST00000562998 AZU1P20160 251 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms