RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 LY96Q9Y6Y9 160 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 GPX1P07203 203 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 CGB3P0DN86 165 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 CGB7P0DN87 165 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 NMUP48645 174 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 LINC00205P59089 165 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 PDE6HQ13956 83 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 MST1LQ2TV78 715 aa6.05□□□□□ -1.44
TCF4-216ENST00000562680 GNG5P63218 68 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 MRPL23Q16540 153 aaKnown RBP6.04□□□□□ -1.44
TCF4-216ENST00000562680 S4R3C0 116 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 EXPH5Q8NEV8 1989 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 IGLV1-47P01700 117 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 ATP5G3P48201 142 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 SPAG8Q99932 426 aaPredicted RBP6.04□□□□□ -1.44
TCF4-216ENST00000562680 SLC25A39Q9BZJ4 359 aaPredicted RBP6.04□□□□□ -1.44
TCF4-216ENST00000562680 OSTCQ9NRP0 149 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 IGLC7A0M8Q6 106 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 INS-IGF2F8WCM5 200 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 SEC61GP60059 68 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 HERVK_113P61574 105 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 CEP295Q9C0D2 2601 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 C9JCJ5 164 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 NPBQ8NG41 125 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 TMEM50AO95807 157 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 ELANEP08246 267 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 PSMG4Q5JS54 123 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 RUSC1-AS1Q66K80 236 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 ZNRD1Q9P1U0 126 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 KLF12Q9Y4X4 402 aa6.04□□□□□ -1.44
TCF4-216ENST00000562680 ATP6V0E1O15342 81 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 CRIP3Q6Q6R5 217 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 ZNF841Q6ZN19 808 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 TTC9CQ8N5M4 171 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 TMEM160Q9NX00 188 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 SRCAPQ6ZRS2 3230 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 IGHV4-30-2A0A087WSY4 118 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 SRSF2Q01130 221 aaKnown RBP6.03□□□□□ -1.44
TCF4-216ENST00000562680 LOXL1Q08397 574 aaPredicted RBP6.03□□□□□ -1.44
TCF4-216ENST00000562680 OR8A1Q8NGG7 326 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 IL36BQ9NZH7 164 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 RNF114Q9Y508 228 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 FAM159AQ6UWV7 190 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 ZNF843Q8N446 348 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 ZNF114Q8NC26 417 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 LY6G5BQ8NDX9 201 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 MYOZ3Q8TDC0 251 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 SPANXB1Q9NS25 103 aaPredicted RBP6.03□□□□□ -1.44
TCF4-216ENST00000562680 SMIM9A6NGZ8 99 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 PPP1R17O96001 155 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 LEPP41159 167 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 OR10J3Q5JRS4 329 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 MORN3Q6PF18 240 aaPredicted RBP6.03□□□□□ -1.44
TCF4-216ENST00000562680 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 SIGLEC15Q6ZMC9 328 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 THAP8Q8NA92 274 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 SHANK2-AS3Q9BTD1 123 aa6.03□□□□□ -1.44
TCF4-216ENST00000562680 H3BTX0 84 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 SRIP30626 198 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 ADMP35318 185 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 C8orf86Q6ZUL3 223 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 SMPXQ9UHP9 88 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 ARHGAP21Q5T5U3 1957 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 NCKAP5O14513 1909 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 TMSB15BA0A087X1C1 80 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 CENPVL3A0A0U1RRI6 287 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 ZNF324O75467 553 aaPredicted RBP6.02□□□□□ -1.45
TCF4-216ENST00000562680 WT1-ASQ06250 92 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 C11orf71Q6IPW1 123 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 RPP21Q9H633 154 aaKnown RBP6.02□□□□□ -1.45
TCF4-216ENST00000562680 PHLDA3Q9Y5J5 127 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 FABP5P3A8MUU1 101 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 VPREB3Q9UKI3 123 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 TNRC6AQ8NDV7 1962 aaKnown RBP6.02□□□□□ -1.45
TCF4-216ENST00000562680 IGHV3OR16-13A0A075B7E8 117 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 IGHV3-74A0A0B4J1X5 117 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 A8MWV9 139 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 RPL23P62829 140 aaKnown RBP6.02□□□□□ -1.45
TCF4-216ENST00000562680 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 FAM53AQ6NSI3 398 aaPredicted RBP6.02□□□□□ -1.45
TCF4-216ENST00000562680 TRACP01848 142 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 IGLC1P0CG04 106 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 PYYP10082 97 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 DEFB125Q8N687 156 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 SIRPDQ9H106 197 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 VSIRQ9H7M9 311 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 DAZ1Q9NQZ3 744 aaKnown RBP6.02□□□□□ -1.45
TCF4-216ENST00000562680 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
TCF4-216ENST00000562680 ATRXP46100 2492 aa6.01□□□□□ -1.45
TCF4-216ENST00000562680 SRRM4A7MD48 611 aaKnown RBP6.01□□□□□ -1.45
TCF4-216ENST00000562680 HBBP68871 147 aa6.01□□□□□ -1.45
TCF4-216ENST00000562680 VWC2Q2TAL6 325 aa6.01□□□□□ -1.45
TCF4-216ENST00000562680 KLF17Q5JT82 389 aaPredicted RBP6.01□□□□□ -1.45
TCF4-216ENST00000562680 OR9G4Q8NGQ1 327 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms