RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 H3BTX0 84 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 CRYGCP07315 174 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 RIGQ13278 110 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 FMC1Q96HJ9 113 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 SVEP1Q4LDE5 3571 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 D6R8Y8 96 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 OVOL3O00110 214 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 KIR2DS2P43631 304 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 PRCDQ00LT1 54 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 SLC25A48Q6ZT89 311 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 FAM169BQ8N8A8 192 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 OR1L4Q8NGR5 311 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 SRSF8Q9BRL6 282 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-203ENST00000562609 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 NPIPB5A8MRT5 1133 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 NDUFS7O75251 213 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 Q71RC1 249 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 SRSF12Q8WXF0 261 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 IGHV1-46P01743 117 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 C2orf83Q53S99 150 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 DLL1O00548 723 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 SMIM20Q8N5G0 67 aa11.13□□□□□ -0.63
GTF3C1-203ENST00000562609 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 IGLV3-9A0A075B6K5 115 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 FSTL3O95633 263 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 TCRAP04437 139 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 RRN3P1Q2M238 152 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 CACNG8Q8WXS5 425 aa11.12□□□□□ -0.63
GTF3C1-203ENST00000562609 RAI1Q7Z5J4 1906 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 FAM216BQ8N7L0 139 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 CCL13Q99616 98 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 WI2-2373I1.2A0A1W2PRP0 233 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 K7ENP7 123 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 GTSCR1Q86UQ5 136 aa11.11□□□□□ -0.63
GTF3C1-203ENST00000562609 DSCAML1Q8TD84 2053 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 THBDP07204 575 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 ORM2P19652 201 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 FCER1GP30273 86 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 MZT1Q08AG7 82 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 Q6AWC8 147 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 ZNF562Q6V9R5 426 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 C1orf122Q6ZSJ8 110 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 LHBP01229 141 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 Q86TA4 180 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
GTF3C1-203ENST00000562609 SMCPP49901 116 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 RPL32P62910 135 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 OR1L8Q8NGR8 309 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 RAXQ9Y2V3 346 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 BRI3O95415 125 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 LOXL3P58215 753 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 Q9H3A6 140 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 ZNRD1Q9P1U0 126 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-203ENST00000562609 UPK2O00526 184 aa11.08□□□□□ -0.63
GTF3C1-203ENST00000562609 SAA2P0DJI9 122 aaPredicted RBP11.08□□□□□ -0.63
GTF3C1-203ENST00000562609 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.63
GTF3C1-203ENST00000562609 AMN1Q8IY45 258 aa11.08□□□□□ -0.63
GTF3C1-203ENST00000562609 ASCL2Q99929 193 aa11.08□□□□□ -0.63
GTF3C1-203ENST00000562609 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.63
GTF3C1-203ENST00000562609 AGRNO00468 2067 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 PAX8Q06710 450 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 ADIPOQQ15848 244 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 CFAP126Q5VTH2 177 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 AKAP6Q13023 2319 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 TEX29Q8N6K0 151 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 PTH2Q96A98 100 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 CALYQ9NYX4 217 aa11.08□□□□□ -0.64
GTF3C1-203ENST00000562609 ODF1Q14990 250 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 RND1Q92730 232 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms