RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 FAM210BQ96KR6 192 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 C17orf112F2Z3M2 114 aa12.73□□□□□ -0.37
CMTM3-204ENST00000562357 H3BQ15 152 aa12.73□□□□□ -0.37
CMTM3-204ENST00000562357 ZNF253O75346 499 aa12.73□□□□□ -0.37
CMTM3-204ENST00000562357 HTN3P15516 51 aa12.73□□□□□ -0.37
CMTM3-204ENST00000562357 TIMM9Q9Y5J7 89 aa12.73□□□□□ -0.37
CMTM3-204ENST00000562357 LYRM9A8MSI8 78 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 P0DMU3 169 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 H2BFSP57053 126 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 TAS2R60P59551 318 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 SAT2Q96F10 170 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-204ENST00000562357 TMEM14CQ9P0S9 112 aa12.72□□□□□ -0.37
CMTM3-204ENST00000562357 H0YIZ8 118 aa12.71□□□□□ -0.37
CMTM3-204ENST00000562357 HIST1H1EP10412 219 aaKnown RBP12.71□□□□□ -0.37
CMTM3-204ENST00000562357 HTN1P15515 57 aa12.71□□□□□ -0.37
CMTM3-204ENST00000562357 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.37
CMTM3-204ENST00000562357 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.37
CMTM3-204ENST00000562357 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.37
CMTM3-204ENST00000562357 TRBV19A0A075B6N1 114 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 H7BYZ3 331 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-204ENST00000562357 LEPP41159 167 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 PDE6HQ13956 83 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 MRPL53Q96EL3 112 aaKnown RBP12.7□□□□□ -0.38
CMTM3-204ENST00000562357 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 ATP5SQ99766 215 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
CMTM3-204ENST00000562357 PRELID1Q9Y255 219 aa12.7□□□□□ -0.38
CMTM3-204ENST00000562357 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
CMTM3-204ENST00000562357 MPC2O95563 127 aa12.69□□□□□ -0.38
CMTM3-204ENST00000562357 IFNA5P01569 189 aa12.69□□□□□ -0.38
CMTM3-204ENST00000562357 ZNF493Q6ZR52 646 aa12.69□□□□□ -0.38
CMTM3-204ENST00000562357 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
CMTM3-204ENST00000562357 BLNKQ8WV28 456 aa12.69□□□□□ -0.38
CMTM3-204ENST00000562357 MRPL32Q9BYC8 188 aaKnown RBP12.69□□□□□ -0.38
CMTM3-204ENST00000562357 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 PYYP10082 97 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 GCSAMLQ5JQS6 135 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 CCDC28AQ8IWP9 274 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 ODF3Q96PU9 254 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 HSPB11Q9Y547 144 aa12.68□□□□□ -0.38
CMTM3-204ENST00000562357 NPIPB6E9PJ23 425 aa12.67□□□□□ -0.38
CMTM3-204ENST00000562357 PRM2P04554 102 aa12.67□□□□□ -0.38
CMTM3-204ENST00000562357 RPL12P30050 165 aaKnown RBP12.67□□□□□ -0.38
CMTM3-204ENST00000562357 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
CMTM3-204ENST00000562357 SLC25A2Q9BXI2 301 aa12.67□□□□□ -0.38
CMTM3-204ENST00000562357 MBD2Q9UBB5 411 aa12.67□□□□□ -0.38
CMTM3-204ENST00000562357 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-204ENST00000562357 J3KRW8 73 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 PTTG1O95997 202 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 GFI1BQ5VTD9 330 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 TMEM263Q8WUH6 116 aaKnown RBP12.66□□□□□ -0.38
CMTM3-204ENST00000562357 PARD6GQ9BYG4 376 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-204ENST00000562357 OR51M1Q9H341 326 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
CMTM3-204ENST00000562357 M0R3E3 92 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 OR7C2O60412 319 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 NBEAP1P0C6P0 100 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 AZU1P20160 251 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 PAXXQ9BUH6 204 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 SMIM3Q9BZL3 60 aa12.65□□□□□ -0.38
CMTM3-204ENST00000562357 EPPK1P58107 5090 aaKnown RBP12.64□□□□□ -0.39
CMTM3-204ENST00000562357 NDUFB4O95168 129 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 TAS2R45P59539 299 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 ICAM4Q14773 271 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 TMEM88Q6PEY1 159 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 EXOC3-AS1Q8N2X6 119 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 LINC00477Q96M19 166 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
CMTM3-204ENST00000562357 BIRC6Q9NR09 4857 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 TRAV12-3A0A0B4J271 114 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 SNURFLB1AK76 121 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 SLC25A5P05141 298 aaKnown RBP12.63□□□□□ -0.39
CMTM3-204ENST00000562357 ATP5G1P05496 136 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 ATP5G3P48201 142 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 FAM122CQ6P4D5 195 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 RNASE8Q8TDE3 154 aaKnown RBP12.63□□□□□ -0.39
CMTM3-204ENST00000562357 RNF141Q8WVD5 230 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 FAM167A-AS1Q96KT0 104 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 PYGO2Q9BRQ0 406 aa12.63□□□□□ -0.39
CMTM3-204ENST00000562357 PLAC8L1A1L4L8 177 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 CBY3A6NI87 242 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 F5H768 121 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 OR10J4P0C629 311 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 CSN1S1P47710 185 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 UBE2L3P68036 154 aaKnown RBP12.62□□□□□ -0.39
CMTM3-204ENST00000562357 KIR3DS1Q14943 382 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 KHDC3LQ587J8 217 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 TMEM78Q5T7P6 136 aa12.62□□□□□ -0.39
CMTM3-204ENST00000562357 MED28Q9H204 178 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms