RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
VPS9D1-AS1-201ENST00000562298 SAT2Q96F10 170 aaPredicted RBP11.59□□□□□ -0.55
VPS9D1-AS1-201ENST00000562298 Q9H8V8 135 aa11.59□□□□□ -0.55
VPS9D1-AS1-201ENST00000562298 A0A0J9YY99 117 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 GAGE7O76087 117 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 M6PRP20645 277 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 C10orf113Q5VZT2 155 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 TRAV5A0A0B4J249 113 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 J3KRW8 73 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CCSO14618 274 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CT45A10P0DMU9 189 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CCDC28AQ8IWP9 274 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 MAPKAPK5-AS1Q8N8E1 139 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 ZNF503Q96F45 646 aa11.57□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 TRAV12-3A0A0B4J271 114 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 NPIPB6E9PJ23 425 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 RLN2P04090 185 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CAMLGP49069 296 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 ESRGQ1W209 222 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 Q9H3A6 140 aa11.56□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CENPXA8MT69 81 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 SNURFLB1AK76 121 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 IL7P13232 177 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 MIC13Q5XKP0 118 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 SPATA12Q7Z6I5 190 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 NRARPQ7Z6K4 114 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 ZNF431Q8TF32 576 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 C11orf1Q9H5F2 150 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 DNAJC4Q9NNZ3 241 aa11.55□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 H3BNG1 76 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 L7N2F9 121 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CST7O76096 145 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 VAMP2P63027 116 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 TTC32Q5I0X7 151 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 Q6ZTI0 123 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 ZNF586Q9NXT0 402 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 WDR83OSQ9Y284 106 aa11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 LSM5Q9Y4Y9 91 aaKnown RBP11.54□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 LEPP41159 167 aa11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 BCAP31P51572 246 aa11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 CAV2P51636 162 aa11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 GUK1Q16774 197 aa11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 Q6ZRG5 221 aa11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 MRPS16Q9Y3D3 137 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-AS1-201ENST00000562298 FAM24AA6NFZ4 105 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 FAM25EA8MYX2 175 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 M0R3E3 92 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 PLA2G10O15496 165 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 KRTAP10-2P60368 255 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 RAB31Q13636 194 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 ZNF846Q147U1 533 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 VWC2Q2TAL6 325 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 C11orf72Q8NBR9 251 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 OR1L4Q8NGR5 311 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 VSIG2Q96IQ7 327 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 UQCC1Q9NVA1 299 aa11.52□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 TRBV19A0A075B6N1 114 aa11.51□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 A0A1W2PPQ1 181 aa11.51□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 ZNF253O75346 499 aa11.51□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 ERCC8Q13216 396 aa11.51□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 CNPY1Q3B7I2 92 aa11.51□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 PFDN5Q99471 154 aa11.51□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 A0A096LPF7 62 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 UBE2L5PA0A1B0GUS4 154 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 NDUFB4O95168 129 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 SLC25A5P05141 298 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 Q8N1X5 172 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 C18orf15Q96N68 181 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 GSN-AS1Q9NRJ2 163 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 SLC39A9Q9NUM3 307 aa11.5□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 TRAV6A0A075B6T7 132 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 C7orf71A4D174 169 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 C5orf51A6NDU8 294 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 KLLNB2CW77 178 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 LYRM1O43325 122 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 BAXQ07812 192 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 CD300CQ08708 224 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 LYRM2Q9NU23 88 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 TRGV2A0A075B6R0 118 aa11.48□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 IGSF23A1L1A6 192 aa11.48□□□□□ -0.57
VPS9D1-AS1-201ENST00000562298 TCRBP04435 133 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms