RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CST9LP1Q5W188 147 aa9.44□□□□□ -0.9
CMTM4-203ENST00000561680 C5orf17Q8NAS9 161 aa9.44□□□□□ -0.9
CMTM4-203ENST00000561680 FAM110AQ9BQ89 295 aa9.44□□□□□ -0.9
CMTM4-203ENST00000561680 MAP6D1Q9H9H5 199 aa9.44□□□□□ -0.9
CMTM4-203ENST00000561680 VAX2Q9UIW0 290 aa9.44□□□□□ -0.9
CMTM4-203ENST00000561680 LINC00862A6NCI5 91 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 SLC25A5P05141 298 aaKnown RBP9.43□□□□□ -0.9
CMTM4-203ENST00000561680 PSMG4Q5JS54 123 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 ARL6IP6Q8N6S5 226 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 LINC00052Q96N35 136 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 RARRES2Q99969 163 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
CMTM4-203ENST00000561680 ZNF705FA8MVS1 300 aaPredicted RBP9.42□□□□□ -0.9
CMTM4-203ENST00000561680 G3V4G9 280 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 CD7P09564 240 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 CD81P60033 236 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 GNG5P63218 68 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 CMTM2Q8TAZ6 248 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 RXFP4Q8TDU9 374 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 RPUSD4Q96CM3 377 aaKnown RBP9.42□□□□□ -0.9
CMTM4-203ENST00000561680 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
CMTM4-203ENST00000561680 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 DIRC3C9JPN6 131 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 NDUFS6O75380 124 aaKnown RBP9.41□□□□□ -0.9
CMTM4-203ENST00000561680 TCRAP04437 139 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 CSN1S1P47710 185 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
CMTM4-203ENST00000561680 DEFB131AP59861 70 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
CMTM4-203ENST00000561680 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 MGAM2Q2M2H8 2515 aa9.41□□□□□ -0.9
CMTM4-203ENST00000561680 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 F6UZH7 168 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 PEX7O00628 323 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 PDE6DO43924 150 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 DEFB1P60022 68 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 FOXI2Q6ZQN5 318 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 GTSCR1Q86UQ5 136 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 COMMD7Q86VX2 200 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 HIST1H2BAQ96A08 127 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 SMDT1Q9H4I9 107 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 ZMAT5Q9UDW3 170 aaKnown RBP9.4□□□□□ -0.9
CMTM4-203ENST00000561680 RPH3ALQ9UNE2 315 aa9.4□□□□□ -0.9
CMTM4-203ENST00000561680 IGKV2-40A0A087WW87 121 aaPredicted RBP9.39□□□□□ -0.91
CMTM4-203ENST00000561680 A0A0J9YX75 114 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 RBAKDNA6NC62 111 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 F6UB75 175 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 IGKV2D-40P01614 121 aaPredicted RBP9.39□□□□□ -0.91
CMTM4-203ENST00000561680 PRB4P10163 310 aaPredicted RBP9.39□□□□□ -0.91
CMTM4-203ENST00000561680 SRSF3P84103 164 aaKnown RBP9.39□□□□□ -0.91
CMTM4-203ENST00000561680 PEA15Q15121 130 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 ZNF124Q15973 351 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
CMTM4-203ENST00000561680 GOLT1AQ6ZVE7 132 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 CYB561D1Q8N8Q1 229 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 C2CD4CQ8TF44 421 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 PRR25Q96S07 402 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
CMTM4-203ENST00000561680 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
CMTM4-203ENST00000561680 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
CMTM4-203ENST00000561680 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
CMTM4-203ENST00000561680 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
CMTM4-203ENST00000561680 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
CMTM4-203ENST00000561680 EIF4E3Q8N5X7 224 aaKnown RBP9.38□□□□□ -0.91
CMTM4-203ENST00000561680 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
CMTM4-203ENST00000561680 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
CMTM4-203ENST00000561680 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
CMTM4-203ENST00000561680 NBEAL1Q6ZS30 2694 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 KNCNA6PVL3 124 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 A8MTW9 85 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 C9JQL5 133 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 NPIPB6E9PJ23 425 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 K7EQM0 130 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 AKR1C3P42330 323 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 HIST1H1AQ02539 215 aaPredicted RBP9.37□□□□□ -0.91
CMTM4-203ENST00000561680 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 UQCC3Q6UW78 93 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 Q8N1Y9 231 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 VGLL1Q99990 258 aa9.37□□□□□ -0.91
CMTM4-203ENST00000561680 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 H3BMM0 161 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 IGLV2-11P01706 119 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 ZNF705DP0CH99 300 aaPredicted RBP9.36□□□□□ -0.91
CMTM4-203ENST00000561680 ZNF705BP0CI00 300 aaPredicted RBP9.36□□□□□ -0.91
CMTM4-203ENST00000561680 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
CMTM4-203ENST00000561680 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 FMC1Q96HJ9 113 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 LINC00479Q96M42 142 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms