RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 NPIPB6E9PJ23 425 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 CT83Q5H943 113 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 PRR27Q6MZM9 219 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 LINC00322Q6ZN03 302 aaPredicted RBP9.85□□□□□ -0.83
SNX1-211ENST00000560829 TRAV8-2A0A0B4J237 113 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 LCN12Q6JVE5 192 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 C8orf86Q6ZUL3 223 aa9.85□□□□□ -0.83
SNX1-211ENST00000560829 FLNAP21333 2647 aaKnown RBP9.85□□□□□ -0.83
SNX1-211ENST00000560829 RBAKDNA6NC62 111 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 C5orf52A6NGY3 159 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HLA-DMBP28068 263 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 ACTL10Q5JWF8 245 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
SNX1-211ENST00000560829 Q6ZSV7 163 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 FRZBQ92765 325 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 UFC1Q9Y3C8 167 aa9.84□□□□□ -0.83
SNX1-211ENST00000560829 FAM181BA6NEQ2 426 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 S100A6P06703 90 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 SAPCD1Q5SSQ6 148 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 IGFL4Q6B9Z1 124 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 REC114Q7Z4M0 266 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 KLHDC1Q8N7A1 406 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 OR4B1Q8NGF8 309 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 TSKUQ8WUA8 353 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 RPP21Q9H633 154 aaKnown RBP9.83□□□□□ -0.84
SNX1-211ENST00000560829 SMPXQ9UHP9 88 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 IGKV2-40A0A087WW87 121 aaPredicted RBP9.83□□□□□ -0.84
SNX1-211ENST00000560829 CA1P00915 261 aaPredicted RBP9.83□□□□□ -0.84
SNX1-211ENST00000560829 IGKV2D-40P01614 121 aaPredicted RBP9.83□□□□□ -0.84
SNX1-211ENST00000560829 P01737 135 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 TRGC1P0CF51 173 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
SNX1-211ENST00000560829 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 GBGT1Q8N5D6 347 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 ZC2HC1AQ96GY0 325 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 RHPN1-AS1Q9BWJ2 59 aa9.83□□□□□ -0.84
SNX1-211ENST00000560829 IZUMO1RA6ND01 250 aa9.82□□□□□ -0.84
SNX1-211ENST00000560829 ZNF705FA8MVS1 300 aaPredicted RBP9.82□□□□□ -0.84
SNX1-211ENST00000560829 A8MWP6 167 aa9.82□□□□□ -0.84
SNX1-211ENST00000560829 LGALS9O00182 355 aa9.82□□□□□ -0.84
SNX1-211ENST00000560829 SOCS3O14543 225 aa9.82□□□□□ -0.84
SNX1-211ENST00000560829 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
SNX1-211ENST00000560829 CDX1P47902 265 aaPredicted RBP9.82□□□□□ -0.84
SNX1-211ENST00000560829 SNRPEP62304 92 aaKnown RBP9.82□□□□□ -0.84
SNX1-211ENST00000560829 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
SNX1-211ENST00000560829 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
SNX1-211ENST00000560829 FAM231BA6NCW3 169 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 UBE2CO00762 179 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 COX19Q49B96 90 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 RNF182Q8N6D2 247 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 PRR25Q96S07 402 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 VGLL1Q99990 258 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 GFRA4Q9GZZ7 299 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 HECTD1Q9ULT8 2610 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 TMEM213A2RRL7 107 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 A8MWL6 223 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 TCL1AP56279 114 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
SNX1-211ENST00000560829 C16orf92Q96LL3 132 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 NEU1Q99519 415 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 SAV1Q9H4B6 383 aaPredicted RBP9.81□□□□□ -0.84
SNX1-211ENST00000560829 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
SNX1-211ENST00000560829 FASNP49327 2511 aaKnown RBP9.8□□□□□ -0.84
SNX1-211ENST00000560829 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 A0A087WW49 117 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 CT45A10P0DMU9 189 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 BMI1P35226 326 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 CRIP1P50238 77 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 FABP9Q0Z7S8 132 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 RASL11AQ6T310 242 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 WFDC12Q8WWY7 111 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 PPP1R14DQ9NXH3 145 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
SNX1-211ENST00000560829 PRB4P10163 310 aaPredicted RBP9.79□□□□□ -0.84
SNX1-211ENST00000560829 C8orf49Q96NF6 230 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 HIGD1CA8MV81 97 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 MT-ND6P03923 174 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 SRD5A1P18405 259 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 HOXD3P31249 432 aaPredicted RBP9.79□□□□□ -0.84
SNX1-211ENST00000560829 HILS1P60008 231 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms