RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CBLN2Q8IUK8 224 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 SLC24A4Q8NFF2 622 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 OR10G4Q8NGN3 311 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 TMEM170AQ8WVE7 144 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 NPCDR1Q9BY65 106 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 MAP1LC3BQ9GZQ8 125 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 FKBP11Q9NYL4 201 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 UBR4Q5T4S7 5183 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 SMCO3A2RU48 225 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 K7EQG2 157 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 IGHV3-48P01763 117 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 ZNF688P0C7X2 276 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 ATP5IP56385 69 aaPredicted RBP7.04□□□□□ -1.28
TPM1-225ENST00000560679 ACOT6Q3I5F7 207 aaPredicted RBP7.04□□□□□ -1.28
TPM1-225ENST00000560679 RNF212Q495C1 297 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 TOMM20LQ6UXN7 152 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 OR1L8Q8NGR8 309 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 RXFP4Q8TDU9 374 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 HINT2Q9BX68 163 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
TPM1-225ENST00000560679 KCNIP2Q9NS61 270 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 SLC39A9Q9NUM3 307 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 GNG13Q9P2W3 67 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 RABAC1Q9UI14 185 aa7.04□□□□□ -1.28
TPM1-225ENST00000560679 FNDC10F2Z333 226 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 RHEBQ15382 184 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 FAM122CQ6P4D5 195 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 TMEM88Q6PEY1 159 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 OR10G9Q8NGN4 311 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 OR10G7Q8NGN6 311 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 DCANP1Q8TF63 244 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 GRAMD2BQ96HH9 432 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 FAM210BQ96KR6 192 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 SLC25A22Q9H936 323 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 SMCO4Q9NRQ5 59 aa7.03□□□□□ -1.28
TPM1-225ENST00000560679 LOC105371267A0A1B0GV96 52 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 INS-IGF2F8WCM5 200 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 M0R036 132 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 NDUFS6O75380 124 aaKnown RBP7.02□□□□□ -1.29
TPM1-225ENST00000560679 TAGLN2P37802 199 aaKnown RBP7.02□□□□□ -1.29
TPM1-225ENST00000560679 OPRK1P41145 380 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 CDC34P49427 236 aaPredicted RBP7.02□□□□□ -1.29
TPM1-225ENST00000560679 FGF8P55075 233 aaPredicted RBP7.02□□□□□ -1.29
TPM1-225ENST00000560679 MFAP4P55083 255 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 RPL11P62913 178 aaKnown RBP7.02□□□□□ -1.29
TPM1-225ENST00000560679 BSXQ3C1V8 233 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 C2orf83Q53S99 150 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 CYB561D1Q8N8Q1 229 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 STXBP6Q8NFX7 210 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 OR1P1Q8NH06 330 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 MISP3Q96FF7 219 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 MGST2Q99735 147 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 TXN2Q99757 166 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 VAX2Q9UIW0 290 aa7.02□□□□□ -1.29
TPM1-225ENST00000560679 PUS1Q9Y606 427 aaKnown RBP eCLIP7.02□□□□□ -1.29
TPM1-225ENST00000560679 C7orf77A4D0Y5 90 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 ZFP92A6NM28 416 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 MT-CO2P00403 227 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 RNASE2P10153 161 aaKnown RBP7.01□□□□□ -1.29
TPM1-225ENST00000560679 ZNF705AQ6ZN79 300 aaPredicted RBP7.01□□□□□ -1.29
TPM1-225ENST00000560679 SPATA12Q7Z6I5 190 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 RAB24Q969Q5 203 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 NPVFQ9HCQ7 196 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 RPS10P5Q9NQ39 176 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 MANBALQ9NQG1 85 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 XCL2Q9UBD3 114 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 PXMP4Q9Y6I8 212 aa7.01□□□□□ -1.29
TPM1-225ENST00000560679 NBDYA0A0U1RRE5 68 aa7□□□□□ -1.29
TPM1-225ENST00000560679 ZNF705FA8MVS1 300 aaPredicted RBP7□□□□□ -1.29
TPM1-225ENST00000560679 H3BQ15 152 aa7□□□□□ -1.29
TPM1-225ENST00000560679 GNG7O60262 68 aa7□□□□□ -1.29
TPM1-225ENST00000560679 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
TPM1-225ENST00000560679 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
TPM1-225ENST00000560679 SPART-AS1P0CW21 52 aa7□□□□□ -1.29
TPM1-225ENST00000560679 CEBPGP53567 150 aa7□□□□□ -1.29
TPM1-225ENST00000560679 KRTAP10-2P60368 255 aa7□□□□□ -1.29
TPM1-225ENST00000560679 RAB31Q13636 194 aa7□□□□□ -1.29
TPM1-225ENST00000560679 ZNF600Q6ZNG1 722 aa7□□□□□ -1.29
TPM1-225ENST00000560679 C15orf54Q8N8G6 183 aa7□□□□□ -1.29
TPM1-225ENST00000560679 ZNF114Q8NC26 417 aa7□□□□□ -1.29
TPM1-225ENST00000560679 TVP23CQ96ET8 276 aa7□□□□□ -1.29
TPM1-225ENST00000560679 NEU1Q99519 415 aa7□□□□□ -1.29
TPM1-225ENST00000560679 NIPSNAP3BQ9BS92 247 aa7□□□□□ -1.29
TPM1-225ENST00000560679 DKK2Q9UBU2 259 aa7□□□□□ -1.29
TPM1-225ENST00000560679 EPM2AB3EWF7 344 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 EIF3GO75821 320 aaKnown RBP eCLIP6.99□□□□□ -1.29
TPM1-225ENST00000560679 HTN3P15516 51 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 AKR1C3P42330 323 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 RPL29P47914 159 aaKnown RBP6.99□□□□□ -1.29
TPM1-225ENST00000560679 PSMB3P49720 205 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 EMP1P54849 157 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 ERHP84090 104 aaKnown RBP6.99□□□□□ -1.29
TPM1-225ENST00000560679 PSMG4Q5JS54 123 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 FAM222AQ5U5X8 452 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 MIC13Q5XKP0 118 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 TEPPQ6URK8 271 aa6.99□□□□□ -1.29
TPM1-225ENST00000560679 ZNRF2Q8NHG8 242 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms