RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SELENOKQ9Y6D0 94 aa10.67□□□□□ -0.7
CSPG4P11-201ENST00000560634 C9orf153Q5TBE3 101 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 KLHDC3Q9BQ90 382 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 WDR90Q96KV7 1748 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 SIPA1L1O43166 1804 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 TP53TG1Q9Y2A0 90 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 PATJQ8NI35 1801 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 GATA3P23771 443 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 LY6DQ14210 128 aa10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 RSPO3Q9BXY4 272 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P11-201ENST00000560634 SAA4P35542 130 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 DEFB131AP59861 70 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 DOCK6Q96HP0 2047 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 PSCAO43653 123 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 MMP23AO75900 390 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 MCRIP2Q9BUT9 160 aaKnown RBP10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 IGLC2P0DOY2 106 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 LINC00205P59089 165 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 DEFB104AQ8WTQ1 72 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 NDUFA4L2Q9NRX3 87 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 SPANXCQ9NY87 97 aa10.65□□□□□ -0.7
CSPG4P11-201ENST00000560634 FANCMQ8IYD8 2048 aa10.65□□□□□ -0.71
CSPG4P11-201ENST00000560634 C9orf118A6NHY6 69 aa10.65□□□□□ -0.71
CSPG4P11-201ENST00000560634 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.71
CSPG4P11-201ENST00000560634 SNHG12Q9BXW3 62 aa10.65□□□□□ -0.71
CSPG4P11-201ENST00000560634 C9JQL5 133 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 I3L3M4 83 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 UBE2E1P51965 193 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 UTF1Q5T230 341 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 GBF1Q92538 1859 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 IGKV1-6A0A0C4DH72 117 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 GAGE1Q13065 139 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 F8W1H4 67 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 UBL5Q9BZL1 73 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 ZNF581Q9P0T4 197 aa10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 RBBP6Q7Z6E9 1792 aaKnown RBP10.64□□□□□ -0.71
CSPG4P11-201ENST00000560634 COL8A2P25067 703 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 CFHR2P36980 270 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 SYNJ2BPP57105 145 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 RBMY1FQ15415 496 aaKnown RBP10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 OR11H6Q8NGC7 330 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 GATA4P43694 442 aa10.63□□□□□ -0.71
CSPG4P11-201ENST00000560634 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 TAL2Q16559 108 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 CHD5Q8TDI0 1954 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 TMEM14CQ9P0S9 112 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 ETV2O00321 342 aaPredicted RBP10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 Q8TCH9 128 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 MSRB2Q9Y3D2 182 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 DOCK9Q9BZ29 2069 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 IGHV2-70P01814 119 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 COX8AP10176 69 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 BPESC1Q9GZL8 116 aa10.62□□□□□ -0.71
CSPG4P11-201ENST00000560634 SDHAF1A6NFY7 115 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 DKK1O94907 266 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 PAX9P55771 341 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 PRR25Q96S07 402 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 ARID2Q68CP9 1835 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 TP53BP1Q12888 1972 aaPredicted RBP10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 DOCK7Q96N67 2140 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 SRSF2Q01130 221 aaKnown RBP10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
CSPG4P11-201ENST00000560634 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 E7EQL1 145 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 FHL1Q13642 323 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 ATP6V0E1O15342 81 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 HAPLN4Q86UW8 402 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 V9GYV3 84 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 LOC285556D6RIA3 1793 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 ZNF833PQ6ZTB9 187 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 RALGAPA2Q2PPJ7 1873 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 LTBP1Q14766 1721 aa10.6□□□□□ -0.71
CSPG4P11-201ENST00000560634 F8VRH5 84 aa10.59□□□□□ -0.71
CSPG4P11-201ENST00000560634 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
CSPG4P11-201ENST00000560634 PRO1854Q9UHT4 67 aa10.59□□□□□ -0.71
CSPG4P11-201ENST00000560634 NDUFA12Q9UI09 145 aa10.59□□□□□ -0.71
CSPG4P11-201ENST00000560634 FER1L5A0AVI2 2057 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms